RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 MTG1Q9BT17 334 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM231Q9H6L2 316 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF665Q9H7R5 613 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 HPS4Q9NQG7 708 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 MAN2C1Q9NTJ4 1040 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 ANKMY1Q9P2S6 941 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 MRTO4Q9UKD2 239 aaKnown RBP4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 PPP2R2CQ9Y2T4 447 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 STK36Q9NRP7 1315 aa4.4□□□□□ -1.71
TRAPPC9-216ENST00000634178 ANKRD11Q6UB99 2663 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 MSGN1A6NI15 193 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 KPNA7A9QM74 516 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 BLOC1S5-TXNDC5H3BN57 136 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 SMPD2O60906 423 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 PEX11AO75192 247 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 AKR7A3O95154 331 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 SYNGR4O95473 234 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 HMBSP08397 361 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 TPBGLP0DKB5 382 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ERVK-10P10266 1014 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 B4GALT1P15291 398 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 GNSP15586 552 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ANOS1P23352 680 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 GJB2P29033 226 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 HLA-FP30511 346 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 FEN1P39748 380 aaKnown RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 RPL36AP83881 106 aaKnown RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 MFGE8Q08431 387 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 KLHL30Q0D2K2 578 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 PDZK1IP1Q13113 114 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM132DQ14C87 1099 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 RBBP5Q15291 538 aaKnown RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 TAB1Q15750 504 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 GPAT3Q53EU6 434 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 AFTPHQ6ULP2 937 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ARSKQ6UWY0 536 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ISLR2Q6UXK2 745 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF771Q7L3S4 317 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 RAB42Q8N4Z0 105 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM105Q8N8V8 129 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM178AQ8NBL3 297 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 CCDC197Q8NCU1 140 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR2T11Q8NH01 316 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 C8orf46Q8TAG6 207 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 FCGR1BQ92637 280 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 TOP1MTQ969P6 601 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 UHRF2Q96PU4 802 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 AGPAT1Q99943 283 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 FUNDC2Q9BWH2 189 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 DPEP3Q9H4B8 488 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ATP13A3Q9H7F0 1226 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ECT2Q9H8V3 914 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF556Q9HAH1 456 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 C3orf14Q9HBI5 128 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 ERRFI1Q9UJM3 462 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 U3KQV3 271 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 RAD50Q92878 1312 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 MYO10Q9HD67 2058 aa4.39□□□□□ -1.71
TRAPPC9-216ENST00000634178 YJEFN3A6XGL0 299 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 BMPR1BO00238 502 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 SURF4O15260 269 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 P2RX6O15547 441 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 MLNRO43193 412 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 NADKO95544 446 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 TXNDC12O95881 172 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 IFNB1P01574 187 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 MMP1P03956 469 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 PROS1P07225 676 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 CCKARP32238 428 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR1D2P34982 312 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 ACAA2P42765 397 aaKnown RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 MTTPP55157 894 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 GUCY2DQ02846 1103 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 GABPB1Q06547 395 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 PDIA5Q14554 519 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR1C1Q15619 314 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 C3AR1Q16581 482 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF718Q3SXZ3 478 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 CMPK2Q5EBM0 449 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 RTL6Q6ICC9 239 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZCCHC12Q6PEW1 402 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 FAM159AQ6UWV7 190 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 CWC27Q6UX04 472 aaKnown RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 CIARTQ8N365 385 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 LRRC17Q8N6Y2 441 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR4L1Q8NH43 312 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 DQX1Q8TE96 717 aaKnown RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 TCP11Q8WWU5 503 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 NECTIN4Q96NY8 510 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 TAAR6Q96RI8 345 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 CBWD1Q9BRT8 395 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 FUCA2Q9BTY2 467 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 PAPOLGQ9BWT3 736 aaKnown RBP4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 SIRPDQ9H106 197 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 SLC26A1Q9H2B4 701 aa4.38□□□□□ -1.71
TRAPPC9-216ENST00000634178 MTHFD2LQ9H903 347 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms