RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TRIM45Q9H8W5 580 aaPredicted RBP7.07□□□□□ -1.28
PKP4-217ENST00000628904 MYNNQ9NPC7 610 aa7.07□□□□□ -1.28
PKP4-217ENST00000628904 C1GALT1Q9NS00 363 aa7.07□□□□□ -1.28
PKP4-217ENST00000628904 CNOT11Q9UKZ1 510 aaKnown RBP7.07□□□□□ -1.28
PKP4-217ENST00000628904 AP3M1Q9Y2T2 418 aa7.07□□□□□ -1.28
PKP4-217ENST00000628904 ENPP4Q9Y6X5 453 aa7.07□□□□□ -1.28
PKP4-217ENST00000628904 IGKV1-8A0A0C4DH67 115 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 A0A1B0GVT2 93 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 A0A1W2PQF6 199 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 BLOC1S5-TXNDC5H3BN57 136 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PDE9AO76083 593 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PTHP01270 115 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 IFI30P13284 250 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 GNSP15586 552 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PTPN6P29350 595 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 AHRP35869 848 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 KIR2DL1P43626 348 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 CMPK2Q5EBM0 449 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 EOGTQ5NDL2 527 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ABHD17CQ6PCB6 329 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PLEKHG7Q6ZR37 379 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PEX5LQ8IYB4 626 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 OR2I1PQ8NGU4 316 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ZNF675Q8TD23 568 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 VOPP1Q96AW1 172 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 SLC25A36Q96CQ1 311 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 LGALS12Q96DT0 336 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 HDHD5Q9BXW7 423 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 DDX28Q9NUL7 540 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 COMMD3Q9UBI1 195 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 TRANK1O15050 2925 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 H0YAE9 185 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 GTPBP1O00178 669 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 HLA-DQA2P01906 255 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 CAPNS1P04632 268 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 KHKP50053 298 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ANXA11P50995 505 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 GFERP55789 205 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 BTG2P78543 158 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 DPTQ07507 201 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 FCHO2Q0JRZ9 810 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 C1DQ13901 141 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 MICAQ29983 383 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 LRIT3Q3SXY7 679 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 GTF2IRD2BQ6EKJ0 949 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ADAMTSL4Q6UY14 1074 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 GTF2IRD2Q86UP8 949 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 NKAIN4Q8IVV8 208 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 TP53I13Q8NBR0 393 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 FAM98AQ8NCA5 519 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 SRFBP1Q8NEF9 429 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 OR4N2Q8NGD1 307 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 SP7Q8TDD2 431 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 HDAC2Q92769 488 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 OR7D2Q96RA2 312 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ZNF559Q9BR84 538 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 GTPBP2Q9BX10 602 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 ATXN7L1Q9ULK2 861 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 GPR55Q9Y2T6 319 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 HEATR5BQ9P2D3 2071 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 TRAV27A0A087WT01 109 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 IGHV3-20A0A0C4DH32 117 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 URADA6NGE7 173 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 A8MV72 311 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 PIP5K1CO60331 668 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 SLC2A10O95528 541 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PRG2P13727 222 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PCSK2P16519 638 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 CELP19835 753 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PCGF2P35227 344 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 HNRNPFP52597 415 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 CRISP1P54107 249 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 CSTF1Q05048 431 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 APOFQ13790 326 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 PUM1Q14671 1186 aaKnown RBP eCLIP7.06□□□□□ -1.287e-8■■□□□ 12.9
PKP4-217ENST00000628904 NFATC4Q14934 902 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 LARS2Q15031 903 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 TBC1D25Q3MII6 688 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 CRTC2Q53ET0 693 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 FAM69BQ5VUD6 431 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ZNF691Q5VV52 312 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 NLRP8Q86W28 1048 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 LRRC25Q8N386 305 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 SYNPOQ8N3V7 929 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ZFYVE21Q9BQ24 234 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 TEX12Q9BXU0 123 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 SYNPO2LQ9H987 977 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 FAM60AQ9NP50 221 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ATP13A2Q9NQ11 1180 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ERVK13-1Q9NX77 482 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 YARS2Q9Y2Z4 477 aaKnown RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 CORINQ9Y5Q5 1042 aa7.06□□□□□ -1.28
PKP4-217ENST00000628904 ZFHX2Q9C0A1 2572 aaPredicted RBP7.06□□□□□ -1.28
PKP4-217ENST00000628904 CHRM4P08173 479 aa7.05□□□□□ -1.28
PKP4-217ENST00000628904 ZNF10P21506 573 aaPredicted RBP7.05□□□□□ -1.28
PKP4-217ENST00000628904 LIPAP38571 399 aa7.05□□□□□ -1.28
PKP4-217ENST00000628904 NAA10P41227 235 aaPredicted RBP7.05□□□□□ -1.28
PKP4-217ENST00000628904 MLLT3P42568 568 aaPredicted RBP7.05□□□□□ -1.28
PKP4-217ENST00000628904 SH3BGRP55822 239 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms