RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MARCH9Q86YJ5 346 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 COX18Q8N8Q8 333 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 FBLIM1Q8WUP2 373 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 TANKQ92844 425 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 RIT1Q92963 219 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 AURKBQ96GD4 344 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 SLC35G5Q96KT7 338 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZNF768Q9H5H4 540 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 VNN3Q9NY84 501 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 TMEFF2Q9UIK5 374 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 KCND3Q9UK17 655 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 APC2O95996 2303 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 E9PQ18 207 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ADAMDEC1O15204 470 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 CASC3O15234 703 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 AIFM1O95831 613 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 HPRP00739 348 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ELK4P28324 431 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 AQP1P29972 269 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 YAP1P46937 504 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 EEF1A2Q05639 463 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 RBBP4Q09028 425 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 LASP1Q14847 261 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZCCHC7Q8N3Z6 543 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 OR5M3Q8NGP4 307 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 RASSF5Q8WWW0 418 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZNF347Q96SE7 839 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 GPR27Q9NS67 375 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 SELENONQ9NZV5 590 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 TEKT2Q9UIF3 430 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 GMPPBQ9Y5P6 360 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ATE1O95260 518 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ETHE1O95571 254 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 CCT3P49368 545 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 HLCSP50747 726 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 PRSS42Q7Z5A4 293 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 CLVS1Q8IUQ0 354 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 CARFQ8N187 725 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 D2HGDHQ8N465 521 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 WDR20Q8TBZ3 569 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 STT3BQ8TCJ2 826 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 PMEPA1Q969W9 287 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 BHLHE41Q9C0J9 482 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 CCNB1IP1Q9NPC3 277 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 MKKSQ9NPJ1 570 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 CHCHD3Q9NX63 227 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 COL6A3P12111 3177 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 NUP214P35658 2090 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 DNAH14Q0VDD8 3507 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 STMND1H3BQB6 276 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 KCNK5O95279 499 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 SPINK2P20155 84 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 RAB39AQ14964 217 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 VN1R4Q7Z5H5 301 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 ZPBPQ9BS86 351 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 SLC35A5Q9BS91 424 aa11.69□□□□□ -0.54
SYNGAP1-207ENST00000628646 TMEM229AB2RXF0 380 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 DSCR3O14972 297 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 GALR3O60755 368 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 NSA2O95478 260 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 ID4P47928 161 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 CRYBA2P53672 197 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 RAB38P57729 211 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 FBXW4P57775 412 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 PCDH1Q08174 1060 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 SERTAD2Q14140 314 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 E2F2Q14209 437 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 VMACQ2NL98 169 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 CTU2Q2VPK5 515 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 TMEM107Q6UX40 140 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 DEPDC4Q8N2C3 294 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 NXPE2Q96DL1 559 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 NAA50Q9GZZ1 169 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 POLR1BQ9H9Y6 1135 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 SMURF2Q9HAU4 748 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 SLC22A7Q9Y694 548 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 TEX51A0A1B0GUA7 166 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 OR2W5A6NFC9 320 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 KLK10O43240 276 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 GMFGO60234 142 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 CD63P08962 238 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 IGFBP5P24593 272 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 GSTM5P46439 218 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 CLPPQ16740 277 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 IQCCQ4KMZ1 466 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 IFI44LQ53G44 452 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 GTF2IRD2BQ6EKJ0 949 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 GTF2IRD2Q86UP8 949 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 C12orf43Q96C57 262 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 TIMMDC1Q9NPL8 285 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 KRT84Q9NSB2 600 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 BTNL2Q9UIR0 455 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 MRTO4Q9UKD2 239 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 PCDHGB3Q9Y5G1 929 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 C17orf105B2RV13 164 aa11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 SCAMP2O15127 329 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-207ENST00000628646 BRINP1O60477 761 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms