RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ZNF845Q96IR2 970 aaPredicted RBP13.28□□□□□ -0.28
PNKP-218ENST00000625299 LCORQ96JN0 433 aaPredicted RBP13.28□□□□□ -0.28
PNKP-218ENST00000625299 GPR22Q99680 433 aa13.28□□□□□ -0.28
PNKP-218ENST00000625299 RBBP8Q99708 897 aa13.28□□□□□ -0.28
PNKP-218ENST00000625299 KLHL4Q9C0H6 718 aa13.28□□□□□ -0.28
PNKP-218ENST00000625299 CXorf56Q9H5V9 222 aa13.28□□□□□ -0.28
PNKP-218ENST00000625299 HEY2Q9UBP5 337 aa13.28□□□□□ -0.28
PNKP-218ENST00000625299 KERAO60938 352 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 CRHP06850 196 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 LOXP28300 417 aaPredicted RBP13.27□□□□□ -0.29
PNKP-218ENST00000625299 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.29
PNKP-218ENST00000625299 HMGCS1Q01581 520 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 KRTAP1-1Q07627 177 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 ILF2Q12905 390 aaKnown RBP13.27□□□□□ -0.29
PNKP-218ENST00000625299 CUL3Q13618 768 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 SLMAPQ14BN4 828 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 EXOC3L2Q2M3D2 409 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 LIPJQ5W064 366 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 SLC35F6Q8N357 371 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 MEIOBQ8N635 442 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 CDKL2Q92772 493 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 MARK4Q96L34 752 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 UBXN10Q96LJ8 280 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 ATOH8Q96SQ7 321 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 CFL2Q9Y281 166 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 PLLPQ9Y342 182 aa13.27□□□□□ -0.29
PNKP-218ENST00000625299 UQCRHLA0A096LP55 91 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 EFCAB8A8MWE9 144 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 RNF223E7ERA6 249 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 H0YIV9 168 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 ACOX3O15254 700 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 REM1O75628 298 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 KLK1P06870 262 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 PORP16435 677 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 S1PR1P21453 382 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 SSTR1P30872 391 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 DEKP35659 375 aaKnown RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 FEN1P39748 380 aaKnown RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 KIR2DL2P43627 348 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 DR1Q01658 176 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 DLG1Q12959 904 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 VEZF1Q14119 521 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 C10orf62Q5T681 223 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 ZNF704Q6ZNC4 412 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 C22orf34Q6ZV56 151 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 CMC1Q7Z7K0 106 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 TBC1D1Q86TI0 1168 aaPredicted RBP13.26□□□□□ -0.29
PNKP-218ENST00000625299 ISCA2Q86U28 154 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 ZNF610Q8N9Z0 462 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 OR52R1Q8NGF1 315 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 FIG4Q92562 907 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 TMBIM1Q969X1 311 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 TMCO6Q96DC7 493 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 DTNBP1Q96EV8 351 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 COL21A1Q96P44 957 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 CPNE1Q99829 537 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 NMRAL1Q9HBL8 299 aa13.26□□□□□ -0.29
PNKP-218ENST00000625299 LRRC14BA6NHZ5 514 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 SEC14L5O43304 696 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 ERAL1O75616 437 aaKnown RBP13.25□□□□□ -0.29
PNKP-218ENST00000625299 TP53P04637 393 aaPredicted RBP13.25□□□□□ -0.29
PNKP-218ENST00000625299 GFAPP14136 432 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 DPP4P27487 766 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 GP5P40197 560 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 PCYT1AP49585 367 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 PRICKLE4Q2TBC4 344 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 LRRC8AQ8IWT6 810 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 OR4K17Q8NGC6 315 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 PYROXD1Q8WU10 500 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 SERPINI1Q99574 410 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 PINK1Q9BXM7 581 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 MAT2BQ9NZL9 334 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 SNX12Q9UMY4 172 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 PROCRQ9UNN8 238 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 RNF11Q9Y3C5 154 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 TSC22D4Q9Y3Q8 395 aa13.25□□□□□ -0.29
PNKP-218ENST00000625299 GOLGA6L10A6NI86 522 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 C17orf51A8MQB3 221 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 E7ESA3 106 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 H0YC42 278 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 PLAUP00749 431 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 IFNA2P01563 188 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 PEPDP12955 493 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 TPD52P55327 224 aaPredicted RBP13.24□□□□□ -0.29
PNKP-218ENST00000625299 GPX6P59796 221 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 MGAT2Q10469 447 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 CAPRIN1Q14444 709 aaKnown RBP13.24□□□□□ -0.29
PNKP-218ENST00000625299 LTB4RQ15722 352 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 PFKFB4Q16877 469 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 BEX5Q5H9J7 111 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 CCNYL2Q5T2Q4 361 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 RAET1LQ5VY80 246 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 HEPHL1Q6MZM0 1159 aa13.24□□□□□ -0.29
PNKP-218ENST00000625299 PPP4R4Q6NUP7 873 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms