RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 CLCA3PQ9Y6N3 262 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 ARHGEF33A8MVX0 844 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 HLA-EP13747 358 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 EDN3P14138 238 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 NDUFB7P17568 137 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 TNFRSF1BP20333 461 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 FPR3P25089 353 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 RAC1P63000 192 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 KCNJ10P78508 379 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 RBMS2Q15434 407 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 LIPJQ5W064 366 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 Q6ZVU0 165 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 SLC44A2Q8IWA5 706 aaPredicted RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 ENTHD1Q8IYW4 607 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 NAGSQ8N159 534 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 OXR1Q8N573 874 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 C1orf52Q8N6N3 182 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 FAM181AQ8N9Y4 354 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 MRPS31Q92665 395 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 BBS4Q96RK4 519 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 CHCHD6Q9BRQ6 235 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 AMBNQ9NP70 447 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 FBXL2Q9UKC9 423 aa11.78□□□□□ -0.52
LITAF-221ENST00000622633 RUVBL1Q9Y265 456 aaKnown RBP11.78□□□□□ -0.52
LITAF-221ENST00000622633 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.52
LITAF-221ENST00000622633 CD72P21854 359 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ZNF81P51508 661 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 PSMD4P55036 377 aaKnown RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 CLDN20P56880 219 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 RAE1P78406 368 aaKnown RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 SLC3A1Q07837 685 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CAMK2GQ13555 558 aaPredicted RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 PROX2Q3B8N5 592 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 NHLRC3Q5JS37 347 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 TEX30Q5JUR7 227 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CPTPQ5TA50 214 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 ADGRD2Q7Z7M1 963 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 LAX1Q8IWV1 398 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 TCEAL8Q8IYN2 117 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CARFQ8N187 725 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CPXM2Q8N436 756 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 BVESQ8NE79 360 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 DUSP18Q8NEJ0 188 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 LMLNQ96KR4 655 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CMSS1Q9BQ75 279 aaKnown RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 RHBGQ9H310 441 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CDCP1Q9H5V8 836 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 SGK2Q9HBY8 427 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CCNB1IP1Q9NPC3 277 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 TMEM184CQ9NVA4 438 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 PADI2Q9Y2J8 665 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ASB4Q9Y574 426 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 PCDHGA6Q9Y5G7 932 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 SLC35F4A4IF30 521 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 POM121BA6NF01 834 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 SCAMP2O15127 329 aaKnown RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 SUV39H1O43463 412 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 PROM1O43490 865 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CHP2O43745 196 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 AOC2O75106 756 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ADH1CP00326 375 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ANXA4P09525 319 aaPredicted RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 C21orf33P30042 268 aaPredicted RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 ACTR1AP61163 376 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 GAB1Q13480 694 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 VEZF1Q14119 521 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 NCF4Q15080 339 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 SEC23BQ15437 767 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 TIGD6Q17RP2 521 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 C9orf152Q5JTZ5 239 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 Q6ZVL8 140 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 HSD11B1LQ7Z5J1 315 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 KRT78Q8N1N4 520 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 SPPL2AQ8TCT8 520 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ZC3HAV1LQ96H79 300 aaKnown RBP11.77□□□□□ -0.53
LITAF-221ENST00000622633 OR4K3Q96R72 315 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 PITX2Q99697 317 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 CRB3Q9BUF7 120 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 SEMA4CQ9C0C4 833 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ANKRD19PQ9H560 264 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 MVB12BQ9H7P6 319 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 SH3BP4Q9P0V3 963 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 HCN2Q9UL51 889 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 HS3ST2Q9Y278 367 aa11.77□□□□□ -0.53
LITAF-221ENST00000622633 ZNF106Q9H2Y7 1883 aaKnown RBP11.76□□□□□ -0.53
LITAF-221ENST00000622633 SCN5AQ14524 2016 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms