RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 NUP43Q8NFH3 380 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 OR52I1Q8NGK6 324 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 OR9A2Q8NGT5 310 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 LRR1Q96L50 414 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 YIPF4Q9BSR8 244 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 POLE4Q9NR33 117 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ABCB10Q9NRK6 738 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 GIMAP4Q9NUV9 329 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 TVP23BQ9NYZ1 205 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 TBC1D29Q9UFV1 150 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 STUB1Q9UNE7 303 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 TRAPPC4Q9Y296 219 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 SZT2Q5T011 3432 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 TICRRQ7Z2Z1 1910 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 A0A1W2PQF6 199 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ZNF670-ZNF695F2Z2N8 137 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 AQP9O43315 295 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 TBX1O43435 398 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 CYP7B1O75881 506 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ZIC2O95409 532 aaPredicted RBP8.85□□□□□ -0.99
PDPN-212ENST00000621990 RAB36O95755 333 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 DNTTP04053 509 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 NR2F6P10588 404 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ALPPL2P10696 532 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 CKMT1AP12532 417 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 CPEP16870 476 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
PDPN-212ENST00000621990 NTSR1P30989 418 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 SOX9P48436 509 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 SEC13P55735 322 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 RAB8AP61006 207 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 BNC1Q01954 994 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 GPAT3Q53EU6 434 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ZNF311Q5JNZ3 666 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 BCDIN3DQ7Z5W3 292 aaKnown RBP8.85□□□□□ -0.99
PDPN-212ENST00000621990 PHC2Q8IXK0 858 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 GNPDA2Q8TDQ7 276 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 TM4SF19Q96DZ7 209 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ACTRT3Q9BYD9 372 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 PLA2G12AQ9BZM1 189 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 QRSL1Q9H0R6 528 aaKnown RBP8.85□□□□□ -0.99
PDPN-212ENST00000621990 CERS4Q9HA82 394 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 FGF20Q9NP95 211 aaPredicted RBP8.85□□□□□ -0.99
PDPN-212ENST00000621990 CRNNQ9UBG3 495 aaPredicted RBP8.85□□□□□ -0.99
PDPN-212ENST00000621990 KLHL20Q9Y2M5 609 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 PCDHGB6Q9Y5F9 930 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 ZNF780BQ9Y6R6 833 aa8.85□□□□□ -0.99
PDPN-212ENST00000621990 SPTBN5Q9NRC6 3674 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 IRGMA1A4Y4 181 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SLC35F4A4IF30 521 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TNFSF14O43557 240 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 EML2O95834 649 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ALPPP05187 535 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 C8orf89P0DMQ9 161 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SMIM10L1P0DMW3 83 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 LAMP2P13473 410 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 EN2P19622 333 aaPredicted RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 IFNGR2P38484 337 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 RPS19P39019 145 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 PPP2CBP62714 309 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 PPP2CAP67775 309 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 CHRNEQ04844 493 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 RAB40BQ12829 278 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TSPAN31Q12999 210 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 CBX3Q13185 183 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 C1DQ13901 141 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 TRAM2Q15035 370 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TJAP1Q5JTD0 557 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 RASSF6Q6ZTQ3 369 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 FAM83FQ8NEG4 500 aaPredicted RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 FLCNQ8NFG4 579 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TMEM163Q8TC26 289 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TRMT61AQ96FX7 289 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 SMIM10Q96HG1 83 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SDHCQ99643 169 aaPredicted RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 CCDC32Q9BV29 185 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TRMT61BQ9BVS5 477 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 ASPNQ9BXN1 380 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 BARHL1Q9BZE3 327 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 KCMF1Q9P0J7 381 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ANKMY1Q9P2S6 941 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SCML1Q9UN30 329 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 GPR55Q9Y2T6 319 aaPredicted RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 TMEM129A0AVI4 362 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 GSAPA4D1B5 854 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 A6NCN8 305 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 PRR23AA6NEV1 266 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ISM1B1AKI9 464 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 KDM4EB2RXH2 506 aaPredicted RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 LOC110117498-PIK3R3F6TDL0 507 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 PRODHO43272 600 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 KLF4O43474 513 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 UBXN7O94888 489 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ACP2P11117 423 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 OMPP47874 163 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TAS2R41P59536 307 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 BTN3A2P78410 334 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 TNFRSF17Q02223 184 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 CD300CQ08708 224 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms