RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 WDR36Q8NI36 951 aaKnown RBP16.42■□□□□ 0.22
FAM3A-222ENST00000621967 EXOSC8Q96B26 276 aaKnown RBP16.42■□□□□ 0.22
FAM3A-222ENST00000621967 PRAP1Q96NZ9 151 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 DDX31Q9H8H2 851 aaKnown RBP16.42■□□□□ 0.22
FAM3A-222ENST00000621967 TM7SF3Q9NS93 570 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 MKLN1Q9UL63 735 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 CFL2Q9Y281 166 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 GPSM3Q9Y4H4 160 aa16.42■□□□□ 0.22
FAM3A-222ENST00000621967 PRAMEF27A3QJZ7 478 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 KMOO15229 486 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 TBX1O43435 398 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 KIAA0513O60268 411 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 CFIP05156 583 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 ENDOUP21128 410 aaKnown RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 CCT3P49368 545 aaKnown RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SPDYE7PQ495Y7 208 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 PEAR1Q5VY43 1037 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 PGBD2Q6P3X8 592 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 LOXL4Q96JB6 756 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 OPALINQ96PE5 141 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 TEFMQ96QE5 360 aaKnown RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 OR2M4Q96R27 311 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 RACGAP1Q9H0H5 632 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 QPCTLQ9NXS2 382 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 ANKMY1Q9P2S6 941 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 ZNF229Q9UJW7 825 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SNX11Q9Y5W9 270 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 GPC6Q9Y625 555 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 MN1Q10571 1320 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 A0A0A6YYD5 115 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 A0A1B0GVT2 93 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SCAMP1O15126 338 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 RASGRP1O95267 797 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 TP53P04637 393 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SCG5P05408 212 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 EIF2B2P49770 351 aaKnown RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 BLKP51451 505 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SMIM11AP58511 58 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SLC13A2Q13183 592 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 ZNF542PQ5EBM4 170 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 RNLSQ5VYX0 342 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 RBM45Q8IUH3 476 aaKnown RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 LINC01555Q8NAE3 123 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 CEP76Q8TAP6 659 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SCARF2Q96GP6 870 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 TRNT1Q96Q11 434 aaKnown RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 TREX2Q9BQ50 279 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-222ENST00000621967 WFDC6Q9BQY6 131 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 ROGDIQ9GZN7 287 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 HHATLQ9HCP6 504 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 SEMA3GQ9NS98 782 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 P2RX2Q9UBL9 471 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 A4GNTQ9UNA3 340 aa16.41■□□□□ 0.22
FAM3A-222ENST00000621967 OR10H3O60404 316 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 PTTG1O95997 202 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 TNFP01375 233 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 ACP5P13686 325 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 CSTF2P33240 577 aaKnown RBP eCLIP16.4■□□□□ 0.22
FAM3A-222ENST00000621967 SOX6P35712 828 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 XKP51811 444 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 CSNK1G2P78368 415 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 ALDH6A1Q02252 535 aaKnown RBP16.4■□□□□ 0.22
FAM3A-222ENST00000621967 EIF2B5Q13144 721 aaKnown RBP16.4■□□□□ 0.22
FAM3A-222ENST00000621967 TP53BP2Q13625 1128 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 DEF8Q6ZN54 512 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 FAM83FQ8NEG4 500 aaPredicted RBP16.4■□□□□ 0.22
FAM3A-222ENST00000621967 SLC7A13Q8TCU3 470 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 CREB3L4Q8TEY5 395 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 KLHL6Q8WZ60 621 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 SLC35G5Q96KT7 338 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 IL4I1Q96RQ9 567 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 IRF2BPLQ9H1B7 796 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 SEC14L3Q9UDX4 400 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 GOLGA4Q13439 2230 aaKnown RBP16.4■□□□□ 0.22
FAM3A-222ENST00000621967 KNL1Q8NG31 2342 aa16.4■□□□□ 0.22
FAM3A-222ENST00000621967 A0A075B6Q4 140 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 HAT1O14929 419 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OR1F1O43749 312 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 SLC28A2O43868 658 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 CLEC3AO75596 197 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 GPX5O75715 221 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 SNX4O95219 450 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 MED26O95402 600 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 SOX14O95416 240 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 IGFBP1P08833 259 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 SLC35G4P0C7Q5 338 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 DRD2P14416 443 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 FEN1P39748 380 aaKnown RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 MAGEA8P43361 318 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 FOXD4Q12950 439 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 NCF4Q15080 339 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 SYPL1Q16563 259 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OCLNQ16625 522 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OR4C11Q6IEV9 310 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 CCDC190Q86UF4 302 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 AMER3Q8N944 861 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OR8J1Q8NGP2 316 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 VANGL1Q8TAA9 524 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 ATOH1Q92858 354 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms