RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PCP4L1A6NKN8 68 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 GALR3O60755 368 aaPredicted RBP9.31□□□□□ -0.92
VTA1-205ENST00000620996 UGT2B17O75795 530 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 TPPPO94811 219 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 ALPPP05187 535 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 RHCEP18577 417 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 PTNP21246 168 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 XCR1P46094 333 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 FNTBP49356 437 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 AFF3P51826 1226 aaKnown RBP9.31□□□□□ -0.92
VTA1-205ENST00000620996 ARFIP1P53367 373 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 OR1D5P58170 312 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 RPP38P78345 283 aaKnown RBP9.31□□□□□ -0.92
VTA1-205ENST00000620996 NPRL3Q12980 569 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MAPK11Q15759 364 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 SYT16Q17RD7 645 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 ZNF691Q5VV52 312 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 CCDC81Q6ZN84 652 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 CA13Q8N1Q1 262 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 CAMKK1Q8N5S9 505 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 BBS10Q8TAM1 723 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MMABQ96EY8 250 aaPredicted RBP9.31□□□□□ -0.92
VTA1-205ENST00000620996 ZNF354BQ96LW1 612 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 WFDC6Q9BQY6 131 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 SPATA5L1Q9BVQ7 753 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 PRR14Q9BWN1 585 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 DGCR6LQ9BY27 220 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 ACTRT3Q9BYD9 372 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 FANCEQ9HB96 536 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 ITGB1BP2Q9UKP3 347 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 SLC9A8Q9Y2E8 581 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 NINQ8N4C6 2090 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 M0R129 80 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 CHST10O43529 356 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MAN1A2O60476 641 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 FAM20BO75063 409 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 TMCC2O75069 709 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 JRKO75564 520 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 CD247P20963 164 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 ALAS2P22557 587 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 HOXC5Q00444 222 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MLLT1Q03111 559 aaPredicted RBP9.31□□□□□ -0.92
VTA1-205ENST00000620996 STX4Q12846 297 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 GPR68Q15743 365 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MICAQ29983 383 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 IQCCQ4KMZ1 466 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 BROXQ5VW32 411 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 VRK2Q86Y07 508 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 GJD3Q8N144 294 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 ZNF614Q8N883 585 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 PSMA8Q8TAA3 256 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 RASSF5Q8WWW0 418 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 NRBF2Q96F24 287 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 C10orf90Q96M02 699 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MS4A4EQ96PG1 132 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 FNDC11Q9BVV2 318 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 GIN1Q9NXP7 522 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 NDUFA13Q9P0J0 144 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 MAU2Q9Y6X3 613 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 CCDC88CQ9P219 2028 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 SPTBP11277 2137 aa9.31□□□□□ -0.92
VTA1-205ENST00000620996 TRBV4-1A0A0J9YWV2 114 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 DNAJB5O75953 348 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PDGFBP01127 241 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 SMIM10L1P0DMW3 83 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 ZNF155Q12901 538 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 ELOAQ14241 798 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 SMN1Q16637 294 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 FAM214AQ32MH5 1076 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 ZC3H14Q6PJT7 736 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 RFPL4BQ6ZWI9 263 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 LSRQ86X29 649 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 SAMD14Q8IZD0 417 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 NLGN4XQ8N0W4 816 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 OR4D11Q8NGI4 311 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 GPR151Q8TDV0 419 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 ZG16BQ96DA0 208 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SMIM10Q96HG1 83 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 COX4I2Q96KJ9 171 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 NMNAT1Q9HAN9 279 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 FSCN3Q9NQT6 498 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 ACER3Q9NUN7 267 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 IMPAD1Q9NX62 359 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 WARS2Q9UGM6 360 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 LRP4O75096 1905 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 IGHV5-51A0A0C4DH38 117 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SYNDIG1LA6NDD5 238 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 LMO7DNF2Z398 122 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 H3BN98 237 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 FCMRO60667 390 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SOX14O95416 240 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 H1F0P07305 194 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 ITGAMP11215 1152 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PRKACBP22694 351 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 KCNJ5P48544 419 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 BCAP31P51572 246 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms