RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PRICKLE3O43900 615 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 JUNP05412 331 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 CHRM5P08912 532 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 IMPA1P29218 277 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF33BQ06732 778 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 GRIN2CQ14957 1233 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF852Q6ZMS4 543 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ERN2Q76MJ5 926 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF695Q8IW36 515 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SLC2A13Q96QE2 648 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SNX18Q96RF0 628 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 PCDHGA6Q9Y5G7 932 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MYH13Q9UKX3 1938 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 EPHB6O15197 1021 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 IRAK2O43187 625 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 CILPO75339 1184 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 KCNK2O95069 426 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 RPS17P08708 135 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 RPL17P18621 184 aaKnown RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ARRB1P49407 418 aaPredicted RBP6.85□□□□□ -1.31
COLCA1-205ENST00000620864 UBE2KP61086 200 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 NPRL3Q12980 569 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 GRM2Q14416 872 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MYLK3Q32MK0 819 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ITPRIPL2Q3MIP1 535 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF417Q8TAU3 575 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MUS81Q96NY9 551 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 SEC61A2Q9H9S3 476 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 KAT6AQ92794 2004 aa6.85□□□□□ -1.31
COLCA1-205ENST00000620864 MAGEB4O15481 346 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FMO6PO60774 539 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 C1RP00736 705 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ADAP00813 363 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 APOA2P02652 100 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 AKR1C4P17516 323 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FOXK1P85037 733 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SCAPQ12770 1279 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLAMF1Q13291 335 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 KCNAB2Q13303 367 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GINS1Q14691 196 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ARHGAP19Q14CB8 494 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RNF212Q495C1 297 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 EARS2Q5JPH6 523 aaKnown RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 PRAMEF14Q5SWL7 426 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 C9orf57Q5W0N0 161 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 LBX2Q6XYB7 198 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF705AQ6ZN79 300 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RABEPKQ7Z6M1 372 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM150AQ86TG1 271 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SFXN5Q8TD22 340 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NT5C3BQ969T7 300 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLC25A36Q96CQ1 311 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FCRL1Q96LA6 429 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 BEX2Q9BXY8 128 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NIPAL2Q9H841 368 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FAM118AQ9NWS6 357 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 DLGAP4Q9Y2H0 992 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 EEF1E1-BLOC1S5C9J1V9 151 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RFXAPO00287 272 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLC1A7O00341 560 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 STBD1O95210 358 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GAAP10253 952 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CPT2P23786 658 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NMBRP28336 390 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ECI1P42126 302 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF763Q0D2J5 394 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 FUT10Q6P4F1 479 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 RETREG3Q86VR2 466 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ANKRD53Q8N9V6 530 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLC30A7Q8NEW0 376 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GRHL3Q8TE85 626 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 TSSK2Q96PF2 358 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NIPSNAP3BQ9BS92 247 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 POLDIP3Q9BY77 421 aaKnown RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ANKRD60Q9BZ19 345 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ADAP2Q9NPF8 381 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 AIG1Q9NVV5 245 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM181Q9P2C4 612 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 UTS2RQ9UKP6 389 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLIT2O94813 1529 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 A8MT66 165 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 F6UZH7 168 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GAPDHSO14556 408 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 BMP2P12643 396 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF43P17038 809 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CXCR4P61073 352 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GSTM4Q03013 218 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 MSMO1Q15800 293 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 DPYSL2Q16555 572 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 SLC18B1Q6NT16 456 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF704Q6ZNC4 412 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM173Q86WV6 379 aaPredicted RBP6.84□□□□□ -1.31
COLCA1-205ENST00000620864 OR6N1Q8NGY5 312 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 ZCCHC10Q8TBK6 192 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 CPT1CQ8TCG5 803 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 GPR22Q99680 433 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 BRF2Q9HAW0 419 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 IL26Q9NPH9 171 aa6.84□□□□□ -1.31
COLCA1-205ENST00000620864 NLKQ9UBE8 527 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms