RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TAS2R7Q9NYW3 318 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 CCL26Q9Y258 94 aa18.43■□□□□ 0.54
PDLIM3-212ENST00000620787 A0A1W2PRU2 124 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 NOS1APO75052 506 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 INPP1P49441 399 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 MAP4K2Q12851 820 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 MRPL28Q13084 256 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 GRIN2CQ14957 1233 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF57Q68EA5 555 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 C11orf74Q86VG3 221 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 SORCS1Q8WY21 1168 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 SCLYQ96I15 445 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF649Q9BS31 505 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 RHBGQ9H310 441 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 DIABLOQ9NR28 239 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 ASB4Q9Y574 426 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 A0A087WUU8 490 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 ZSCAN5BA6NJL1 495 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 HLA-DPB1P04440 258 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 NUDT1P36639 197 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 RAB25P57735 213 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 OR4F15Q8NGB8 312 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 CYB5D2Q8WUJ1 264 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 CHFRQ96EP1 664 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 OTUB1Q96FW1 271 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 HYLS1Q96M11 299 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC46A2Q9BY10 475 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC28A3Q9HAS3 691 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 ATP13A2Q9NQ11 1180 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 TEX10Q9NXF1 929 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 TRPC4Q9UBN4 977 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 TEKT2Q9UIF3 430 aa18.42■□□□□ 0.54
PDLIM3-212ENST00000620787 C2orf92A0A1B0GVN3 265 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 CD8B2A6NJW9 211 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 LEUTXA8MZ59 168 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 RFXAPO00287 272 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 TMPRSS11DO60235 418 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 CD8BP10966 210 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ELK1P19419 428 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 CELP19835 753 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 CFL1P23528 166 aaKnown RBP18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ACADLP28330 430 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 IFNA8P32881 189 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ADAM15Q13444 863 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 LRRC32Q14392 662 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 FAM83HQ6ZRV2 1179 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 SZRD1Q7Z422 152 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 DNAJA4Q8WW22 397 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC38A2Q96QD8 506 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ZDHHC5Q9C0B5 715 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 PHF11Q9UIL8 331 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ADAM30Q9UKF2 790 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 POLHQ9Y253 713 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 LOC105371267A0A1B0GV96 52 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC19A2O60779 497 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 CHRM4P08173 479 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 IFI30P13284 250 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 PPP2R1BP30154 601 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 UQCRC1P31930 480 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 CDH11P55287 796 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ACSM1Q08AH1 577 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 FUT5Q11128 374 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 GPR176Q14439 515 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 GPR162Q16538 588 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ESCO2Q56NI9 601 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF805Q5CZA5 627 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 EOGTQ5NDL2 527 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 PRICKLE2Q7Z3G6 844 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 GNPDA2Q8TDQ7 276 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 NRTNQ99748 197 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 RRAGCQ9HB90 399 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 ACSS1Q9NUB1 689 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 IL36AQ9UHA7 158 aa18.41■□□□□ 0.54
PDLIM3-212ENST00000620787 K7ESM1 405 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 DVL2O14641 736 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 AKAP8O43823 692 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 HK1P19367 917 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 BTG1P62324 171 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF791Q3KP31 576 aaPredicted RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 TMEM91Q6ZNR0 172 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 AMIGO1Q86WK6 493 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 NRSN1Q8IZ57 195 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 OR4M2Q8NGB6 313 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 BBS10Q8TAM1 723 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 SMG7Q92540 1137 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 MRGPRX3Q96LB0 322 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 DHRS9Q9BPW9 319 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 PRR14Q9BWN1 585 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 B3GNT2Q9NY97 397 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 LIPT1Q9Y234 373 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 TCF20Q9UGU0 1960 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 PRRC2BQ5JSZ5 2229 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 FAM170BA6NMN3 283 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 NTN1O95631 604 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC6A1P30531 599 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 CSTF1Q05048 431 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 SREBF2Q12772 1141 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 CLEC12AQ5QGZ9 265 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms