RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 MR1Q95460 341 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 SLC35C1Q96A29 364 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 FOXRED1Q96CU9 486 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 PEX11GQ96HA9 241 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 SENP5Q96HI0 755 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 PIWIL1Q96J94 861 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 HIST1H2AHQ96KK5 128 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 CXorf58Q96LI9 332 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 OR14A2Q96R54 314 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 JMJD8Q96S16 334 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 TMEM209Q96SK2 561 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 MBOAT4Q96T53 435 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 TEAD3Q99594 435 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 RAD9AQ99638 391 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 HIST1H2AJQ99878 128 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 ADAM2Q99965 735 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 HOPXQ9BPY8 73 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 WDR83Q9BRX9 315 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 MRI1Q9BV20 369 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 PARD6GQ9BYG4 376 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 C20orf27Q9GZN8 174 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 MED28Q9H204 178 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 PIGMQ9H3S5 423 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 NXF3Q9H4D5 531 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 RIBC2Q9H4K1 309 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 KIR3DX1Q9H7L2 352 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 ZBTB20Q9HC78 741 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 ADAP2Q9NPF8 381 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMC5-204ENST00000618375 C14orf119Q9NWQ9 140 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 FAM118AQ9NWS6 357 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 PDP1Q9P0J1 537 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 SERGEFQ9UGK8 458 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 C3orf18Q9UK00 162 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 NDRG4Q9ULP0 352 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 CDYLQ9Y232 598 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 AAR2Q9Y312 384 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 SF3B6Q9Y3B4 125 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 CMAHPQ9Y471 501 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 ZFP37Q9Y6Q3 630 aaPredicted RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 COL24A1Q17RW2 1714 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 NRAPQ86VF7 1730 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 DOT1LQ8TEK3 1739 aa3.32□□□□□ -1.88
SMC5-204ENST00000618375 AFDNP55196 1824 aaKnown RBP3.32□□□□□ -1.88
SMC5-204ENST00000618375 YLPM1P49750 1951 aaKnown RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 ZNF646O15015 1829 aaPredicted RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 PHIPQ8WWQ0 1821 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 A0A0G2JLW4 131 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 SERTM2A0A1B0GWG4 89 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 TCRBV9S1A1TA0A576 114 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 TCRBV5S2A0A599 114 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 PRAMEF22A3QJZ6 481 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 LCHNA4D1U4 455 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 OR6C68A6NDL8 312 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 FABP12A6NFH5 140 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 OTOL1A6NHN0 477 aaPredicted RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 MEIS3P2A8K0S8 358 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 ERI2A8K979 691 aaKnown RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 MYO1GB0I1T2 1018 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 DISC1C4P0D8 188 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 TMEM238C9JI98 176 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 INMT-MINDY4F8WBC2 141 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 H0Y8X5 98 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 K7EP13 123 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 TP53I11O14683 189 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 PLA2G10O15496 165 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 PRODHO43272 600 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 SUV39H1O43463 412 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 SLC28A2O43868 658 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 XPNPEP2O43895 674 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 TPST1O60507 370 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 PRAMEF2O60811 474 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 CTAG2O75638 210 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 RP2O75695 350 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 BEST1O76090 585 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 DDAH1O94760 285 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 RECQL5O94762 991 aaPredicted RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 C6orf47O95873 294 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 HPP00738 406 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 SERPINA3P01011 423 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 PIGRP01833 764 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 CD3EP07766 207 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 SNRPB2P08579 225 aaKnown RBP3.31□□□□□ -1.88
SMC5-204ENST00000618375 CTXN2P0C2S0 81 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 OR8U8P0C7N1 319 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 SULT1A3P0DMM9 295 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 SULT1A4P0DMN0 295 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 C6P13671 934 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 PPP3CBP16298 524 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 LBPP18428 481 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 AHCYP23526 432 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 DTYMKP23919 212 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 AKAP5P24588 427 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 LCN1P31025 176 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 HOXC8P31273 242 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 FMO3P31513 532 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 MMP12P39900 470 aa3.31□□□□□ -1.88
SMC5-204ENST00000618375 MAGEB1P43366 347 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms