RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 CRELD1Q96HD1 420 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 GPA33Q99795 319 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 ENOPH1Q9UHY7 261 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 MGAT4BQ9UQ53 548 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 AGAP5A6NIR3 686 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 C5orf67F2Z3F1 127 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 MMP11P24347 488 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 SSX1Q16384 188 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 CLEC12AQ5QGZ9 265 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 STEAP3Q658P3 488 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 PARM1Q6UWI2 310 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 PARP16Q8N5Y8 322 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 KBTBD8Q8NFY9 601 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 OR4K5Q8NGD3 323 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 FGF14Q92915 247 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC17A9Q9BYT1 436 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 NUAK2Q9H093 628 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 C6orf106Q9H6K1 298 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 EGLN3Q9H6Z9 239 aa13.08□□□□□ -0.32
CACNA1C-231ENST00000616390 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 CPSF4LA6NMK7 179 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 H0Y8X5 98 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 CCRL2O00421 344 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 FAAHO00519 579 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 PRKYO43930 277 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 CLEC3AO75596 197 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 GPX5O75715 221 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 AIFM1O95831 613 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 HIST1H1TP22492 207 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 EIF2DP41214 584 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 MC3RP41968 323 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 SNRPNP63162 240 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 OLR1P78380 273 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 BTN3A2P78410 334 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ALDH6A1Q02252 535 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 IRF3Q14653 427 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 GINS1Q14691 196 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 FBXO43Q4G163 708 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ACSM5Q6NUN0 579 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 SHFQ7M4L6 423 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ZER1Q7Z7L7 766 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 OR4N5Q8IXE1 308 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 TBC1D19Q8N5T2 526 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ARMC5Q96C12 935 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 SFXN1Q9H9B4 322 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ENTPD4Q9Y227 616 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 NTNG1Q9Y2I2 539 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 PCDHGA3Q9Y5H0 932 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 LINC01565O15544 149 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 LRRTM2O43300 516 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 MPZL2O60487 215 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 CSO75390 466 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 EML2O95834 649 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 CH25HO95992 272 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 SFTPCP11686 197 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 TRIM23P36406 574 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 UGT2B10P36537 528 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 AVPR1BP47901 424 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 HYAL2Q12891 473 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ILKQ13418 452 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 LIPKQ5VXJ0 399 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 KIAA1161Q6NSJ0 714 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF367Q7RTV3 350 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 LYSMD2Q8IV50 215 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 OR2L3Q8NG85 312 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 PHOSPHO2Q8TCD6 241 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 KLHL6Q8WZ60 621 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 POLR2J2Q9GZM3 115 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ACSS1Q9NUB1 689 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 C14orf119Q9NWQ9 140 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 ERVK13-1Q9NX77 482 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 CNIH4Q9P003 139 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
CACNA1C-231ENST00000616390 SH3D21A4FU49 640 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 POM121BA6NF01 834 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 A8MVJ9 347 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 BTN3A3O00478 584 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 UPK1BO75841 260 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 EPPINO95925 133 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 ASGR2P07307 311 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 ATP5A1P25705 553 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 GSTM5P46439 218 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 RELQ04864 619 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 RUNX1T1Q06455 604 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 FUT5Q11128 374 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SIMC1Q8NDZ2 872 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 CCL4L1Q8NHW4 92 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 ZCCHC10Q8TBK6 192 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 CEP19Q96LK0 163 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 BTBD1Q9H0C5 482 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms