RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZNF646O15015 1829 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 SSC5DA1L4H1 1573 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 hCG_1807616A0A1W2PRN6 198 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 C1orf226A1L170 272 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 FAAHO00519 579 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 MTRF1O75570 445 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 REM1O75628 298 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 LGI1O95970 557 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 RRASP10301 218 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZNF8P17098 575 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 HOXB9P17482 250 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 RNF144AP50876 292 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 GBX2P52951 348 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 MVDP53602 400 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 LIMK1P53667 647 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 PFN3P60673 137 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SMAD3P84022 425 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 PLD1Q13393 1074 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ST3GAL2Q16842 350 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 TCTE1Q5JU00 501 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CDKL4Q5MAI5 379 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 HECTD3Q5T447 861 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 HIST2H2AA3Q6FI13 130 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 GDF6Q6KF10 455 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 RETSATQ6NUM9 610 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SLC27A4Q6P1M0 643 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 PRSS55Q6UWB4 352 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 QSOX2Q6ZRP7 698 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SERPINA12Q8IW75 414 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 GPALPP1Q8IXQ4 340 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CHCHD4Q8N4Q1 142 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZNF433Q8N7K0 673 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 L3MBTL4Q8NA19 623 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZNF740Q8NDX6 193 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 TRMT10AQ8TBZ6 339 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 SMAP2Q8WU79 429 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 ASB11Q8WXH4 323 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 WBP2Q969T9 261 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 GPR137Q96N19 417 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 FOPNLQ96NB1 174 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ABHD1Q96SE0 405 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 TEX12Q9BXU0 123 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ARL6Q9H0F7 186 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 QRSL1Q9H0R6 528 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 NT5DC2Q9H857 520 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 RDH14Q9HBH5 336 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CXXC1Q9P0U4 656 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 MLXQ9UH92 298 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 PHF11Q9UIL8 331 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 DYRK1BQ9Y463 629 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 KCNE1BA0A087WTH5 132 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZC3H12DA2A288 527 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 FAM170BA6NMN3 283 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 H7C0S8 307 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 M0QZQ0 153 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 GPR171O14626 319 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 PDCD5O14737 125 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SYN3O14994 580 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 MMP20O60882 483 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ERAL1O75616 437 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 PPM1BO75688 479 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 OR5F1O95221 314 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SOD1P00441 154 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 HOXD4P09016 255 aaPredicted RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 SERPINA4P29622 427 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SLC6A1P30531 599 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SLC1A3P43003 542 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CLCNKAP51800 687 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 DGCR2P98153 550 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 DSG2Q14126 1118 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SYPL1Q16563 259 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 HSD17B12Q53GQ0 312 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CLLU1Q5K131 121 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 METTL2BQ6P1Q9 378 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 SLC36A4Q6YBV0 504 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 MACC1Q6ZN28 852 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 TMEM91Q6ZNR0 172 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CEACAM19Q7Z692 300 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZER1Q7Z7L7 766 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 LIX1LQ8IVB5 337 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 APCDD1Q8J025 514 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 GPC2Q8N158 579 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZFPM2Q8WW38 1151 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 FATE1Q969F0 183 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 NEIL2Q969S2 332 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 FAM46AQ96IP4 442 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 ZNF607Q96SK3 696 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SEC22CQ9BRL7 303 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 PLA2G12AQ9BZM1 189 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 SLC6A16Q9GZN6 736 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 OR51I1Q9H343 314 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 OSGEPL1Q9H4B0 414 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 DDX31Q9H8H2 851 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
LMO3-235ENST00000616247 EMC7Q9NPA0 242 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CD93Q9NPY3 652 aa6.3□□□□□ -1.4
LMO3-235ENST00000616247 CFAP97Q9P2B7 532 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms