RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ACPTQ9BZG2 426 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 KCNK9Q9NPC2 374 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 SIRT5Q9NXA8 310 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 MID2Q9UJV3 735 aa17.36■□□□□ 0.37
CDX1-202ENST00000616154 A0A1W2PS29 197 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 AHRRA9YTQ3 701 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 SYT5O00445 386 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 UBFD1O14562 309 aaKnown RBP17.35■□□□□ 0.37
CDX1-202ENST00000616154 KIR2DL3P43628 341 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 CRYZQ08257 329 aaKnown RBP17.35■□□□□ 0.37
CDX1-202ENST00000616154 DUSP8Q13202 625 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 ACSF3Q4G176 576 aaPredicted RBP17.35■□□□□ 0.37
CDX1-202ENST00000616154 FRMD7Q6ZUT3 714 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 C1orf52Q8N6N3 182 aaKnown RBP17.35■□□□□ 0.37
CDX1-202ENST00000616154 RELL2Q8NC24 303 aaPredicted RBP17.35■□□□□ 0.37
CDX1-202ENST00000616154 OR4K14Q8NGD5 310 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 SPPL2AQ8TCT8 520 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 SECISBP2Q96T21 854 aaKnown RBP17.35■□□□□ 0.37
CDX1-202ENST00000616154 HBEGFQ99075 208 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 FOXC2Q99958 501 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 CXXC4Q9H2H0 198 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 MCM8Q9UJA3 840 aa17.35■□□□□ 0.37
CDX1-202ENST00000616154 C15orf38-AP3S2A0A0A6YYH1 394 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 DVL2O14641 736 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 SNX4O95219 450 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 EPPINO95925 133 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 ATP1B1P05026 303 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 CPMP14384 443 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 CPA3P15088 417 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 PIK3R1P27986 724 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 HMOX2P30519 316 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 CEACAM8P31997 349 aaPredicted RBP17.34■□□□□ 0.37
CDX1-202ENST00000616154 TMED10P49755 219 aaKnown RBP17.34■□□□□ 0.37
CDX1-202ENST00000616154 HTR6P50406 440 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 ASCL1P50553 236 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 FBXW4P57775 412 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 PCLAFQ15004 111 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 FBXL19-AS1Q494R0 122 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 HLA-DQA1Q5Y7H0 255 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 TMEM64Q6YI46 380 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 GALNT12Q8IXK2 581 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 ZNF615Q8N8J6 731 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 NAXEQ8NCW5 288 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 C17orf47Q8NEP4 570 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 OR6Y1Q8NGX8 325 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 RILPQ96NA2 401 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 ANGPTL4Q9BY76 406 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 POLDIP3Q9BY77 421 aaKnown RBP17.34■□□□□ 0.37
CDX1-202ENST00000616154 UBQLN3Q9H347 655 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 OXSMQ9NWU1 459 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 NPFFR2Q9Y5X5 522 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 DOCK7Q96N67 2140 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 MPDZO75970 2070 aa17.34■□□□□ 0.37
CDX1-202ENST00000616154 KIAA1549Q9HCM3 1950 aa17.33■□□□□ 0.37
CDX1-202ENST00000616154 FAM221AA4D161 298 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 BIRC5O15392 142 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 HPNP05981 417 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 BPGMP07738 259 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 CHN1P15882 459 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 S1PR1P21453 382 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 UQCRC1P31930 480 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 TIMP3P35625 211 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 SERPINB4P48594 390 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 CDK9P50750 372 aaKnown RBP17.33■□□□□ 0.36
CDX1-202ENST00000616154 XKP51811 444 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 RAE1P78406 368 aaKnown RBP17.33■□□□□ 0.36
CDX1-202ENST00000616154 SPIN4Q56A73 249 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 BICRALQ6AI39 1079 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 LACC1Q8IV20 430 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 ARFGAP2Q8N6H7 521 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 TNIP2Q8NFZ5 429 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 ADIPOR1Q96A54 375 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 LRRC46Q96FV0 321 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 ZNF681Q96N22 645 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 TIMP4Q99727 224 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 GPATCH1Q9BRR8 931 aaKnown RBP17.33■□□□□ 0.36
CDX1-202ENST00000616154 PRDM14Q9GZV8 571 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 OR10A5Q9H207 317 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 RASSF1Q9NS23 344 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 NKIRAS1Q9NYS0 192 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 CRIM1Q9NZV1 1036 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 C15orf41Q9Y2V0 281 aa17.33■□□□□ 0.36
CDX1-202ENST00000616154 ACANP16112 2415 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 TRAPPC6AO75865 159 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 CT62P0C5K7 136 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 PORP16435 677 aaPredicted RBP17.32■□□□□ 0.36
CDX1-202ENST00000616154 BMP5P22003 454 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 SOX18P35713 384 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 GSTM5P46439 218 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 NAGLUP54802 743 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 NRG3P56975 720 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 RPP38P78345 283 aaKnown RBP17.32■□□□□ 0.36
CDX1-202ENST00000616154 MGAT2Q10469 447 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 SNTB1Q13884 538 aaKnown RBP17.32■□□□□ 0.36
CDX1-202ENST00000616154 NHSL2Q5HYW2 709 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 FNDC7Q5VTL7 733 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 TRIM46Q7Z4K8 759 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 PACS2Q86VP3 889 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 PM20D2Q8IYS1 436 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 OR7G1Q8NGA0 311 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms