RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SCARF2Q96GP6 870 aaPredicted RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 DPH7Q9BTV6 452 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 GPR174Q9BXC1 333 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 POLDIP3Q9BY77 421 aaKnown RBP13.83□□□□□ -0.2
CDH1-213ENST00000612417 FOXQ1Q9C009 403 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SLC35C2Q9NQQ7 365 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 NDUFB11Q9NX14 153 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SEC14L4Q9UDX3 406 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 TRAPPC4Q9Y296 219 aa13.83□□□□□ -0.2
CDH1-213ENST00000612417 SNRNP200O75643 2136 aaKnown RBP13.82□□□□□ -0.2
CDH1-213ENST00000612417 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 LRIT2A6NDA9 550 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 OR52A4PA6NMU1 304 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 CHURC1-FNTBB4DL54 471 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 STK25O00506 426 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 LCMT2O60294 686 aaKnown RBP13.82□□□□□ -0.2
CDH1-213ENST00000612417 NME6O75414 186 aaPredicted RBP13.82□□□□□ -0.2
CDH1-213ENST00000612417 TPPPO94811 219 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 RASGRP1O95267 797 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
CDH1-213ENST00000612417 KHKP50053 298 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 PRDX1Q06830 199 aaKnown RBP13.82□□□□□ -0.2
CDH1-213ENST00000612417 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
CDH1-213ENST00000612417 UAP1L1Q3KQV9 507 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 NDUFAF5Q5TEU4 345 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 Q6ZSR6 202 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 COMTD1Q86VU5 262 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 ZNF687Q8N1G0 1237 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 AMER3Q8N944 861 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 SFXN5Q8TD22 340 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 SPATA5L1Q9BVQ7 753 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 TSSK6Q9BXA6 273 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 TPSD1Q9BZJ3 242 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 AICDAQ9GZX7 198 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 MAN2C1Q9NTJ4 1040 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 CLEC2DQ9UHP7 191 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 SLC9A8Q9Y2E8 581 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 KNL1Q8NG31 2342 aa13.82□□□□□ -0.2
CDH1-213ENST00000612417 MDC1Q14676 2089 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 NR2F1P10589 423 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ALOX12P18054 663 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PSMA1P25786 263 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 SSR2P43308 183 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 CRYBB2P43320 205 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 DEFA1P59665 94 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 DEFA3P59666 94 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 MLLT11Q13015 90 aaPredicted RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 SELENBP1Q13228 472 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PIN1Q13526 163 aaPredicted RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 GAS6Q14393 721 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PODNL1Q6PEZ8 512 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ZNF793Q6ZN11 406 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 WDR53Q7Z5U6 358 aaPredicted RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 SLC34A3Q8N130 599 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 TCEANCQ8N8B7 351 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 RLN3Q8WXF3 142 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SHDQ96IW2 340 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SDHCQ99643 169 aaPredicted RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 SLC30A2Q9BRI3 323 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 FAIM2Q9BWQ8 316 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 KLHL25Q9H0H3 589 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 XKR8Q9H6D3 395 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 MVB12BQ9H7P6 319 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SACM1LQ9NTJ5 587 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ZCCHC3Q9NUD5 404 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 ZNF670-ZNF695F2Z2N8 137 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PRAMEF26H0Y7S4 382 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 CASC3O15234 703 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 DLGAP3O95886 979 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 IGHV4-34P06331 123 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 HBQ1P09105 142 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 AK4P27144 223 aaPredicted RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 NTSP30990 170 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SOX3P41225 446 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ANXA11P50995 505 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 RAB28P51157 221 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ARFIP1P53367 373 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SRP54P61011 504 aaKnown RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 YPEL5P62699 121 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 EFNB1P98172 346 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 GNA13Q14344 377 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ZIC1Q15915 447 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 ENTPD8Q5MY95 495 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PRAMEF8Q5VWM4 474 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PRAMEF7Q5VXH5 474 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 C1orf94Q6P1W5 598 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 PEX5LQ8IYB4 626 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 SIX5Q8N196 739 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 CLIP4Q8N3C7 705 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 FAM160A2Q8N612 972 aaPredicted RBP13.81□□□□□ -0.2
CDH1-213ENST00000612417 FRMD1Q8N878 549 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 MORN4Q8NDC4 146 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 OR5D16Q8NGK9 328 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 OR2A1Q8NGT9 310 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 XAGE5Q8WWM1 108 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 FGF11Q92914 225 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 UCN3Q969E3 161 aa13.81□□□□□ -0.2
CDH1-213ENST00000612417 EFHD2Q96C19 240 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms