RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 NCF1CA8MVU1 366 aaPredicted RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TGFBR3LH3BV60 316 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 K7EPI3 171 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 UBXN8O00124 270 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 COPEO14579 308 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CLGNO14967 610 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TMPRSS2O15393 492 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 RGS16O15492 202 aaPredicted RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TAPBPO15533 448 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 LCMT2O60294 686 aaKnown RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 UGDHO60701 494 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 H2AFYO75367 372 aaKnown RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 WDR47O94967 919 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 GFAPP14136 432 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 NCF1P14598 390 aaPredicted RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PPP2R1BP30154 601 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 HPDP32754 393 aaPredicted RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 SCTRP47872 440 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 EEF1A1P68104 462 aaKnown RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ZNF844Q08AG5 666 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 LAPTM5Q13571 262 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 E2F2Q14209 437 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 SETDB1Q15047 1291 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TBCCQ15814 346 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PDK4Q16654 411 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PFKFB4Q16877 469 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ZNF791Q3KP31 576 aaPredicted RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 KRT71Q3SY84 523 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ELOA3BQ3SY89 546 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TNFAIP8L3Q5GJ75 292 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 BEX5Q5H9J7 111 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PAGE2BQ5JRK9 111 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CEP85LQ5SZL2 805 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 EEF1A1P5Q5VTE0 462 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ADAM5Q6NVV9 412 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ASPGQ86U10 573 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 LRRC17Q8N6Y2 441 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CAMKVQ8NCB2 501 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ELOA3Q8NG57 546 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TTLQ8NG68 377 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 OR4K1Q8NGD4 311 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 OR2W6PQ8NHA6 318 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 RDH11Q8TC12 318 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PAQR8Q8TEZ7 354 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ZFAND2BQ8WV99 257 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 SREK1Q8WXA9 508 aaKnown RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 AKAP1Q92667 903 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 UBE2E3Q969T4 207 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PYCR2Q96C36 320 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 STARD4Q96DR4 205 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PGM2Q96G03 612 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 OR4K3Q96R72 315 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 UCN2Q96RP3 112 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TM9SF2Q99805 663 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 AIF1LQ9BQI0 150 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TMEM79Q9BSE2 394 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 UGT2B28Q9BY64 529 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 IQCGQ9H095 443 aaKnown RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 NT5DC2Q9H857 520 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 VIPAS39Q9H9C1 493 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 SSU72Q9NP77 194 aaKnown RBP6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 DNAJC11Q9NVH1 559 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ELOVL5Q9NYP7 299 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 XPR1Q9UBH6 696 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 OPTCQ9UBM4 332 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 DTX4Q9Y2E6 619 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 SLC6A5Q9Y345 797 aa6.5□□□□□ -1.37
PTCHD3P1-201ENST00000612350 TRBC2A0A5B9 178 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 C16orf97H3BN30 126 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 H3BQF6 201 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 GOLGA8RI6L899 631 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CCNT2O60583 730 aaKnown RBP6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ALX3O95076 343 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 VENTXO95231 258 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 HPNP05981 417 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 C1GALT1C1LP0DN25 315 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 H2AFXP16104 143 aaPredicted RBP6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 EPB42P16452 691 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ATP5F1P24539 256 aaPredicted RBP6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 GDF1P27539 372 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 SERPINB1P30740 379 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 AHRP35869 848 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CASP2P42575 452 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 HSPA7P48741 367 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CDK9P50750 372 aaKnown RBP6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 KCNJ2P63252 427 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ASPHQ12797 758 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 GAB1Q13480 694 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PWP1Q13610 501 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 RCAN2Q14206 197 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 CASP8Q14790 479 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 HERC3Q15034 1050 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 HIST2H2ACQ16777 129 aaPredicted RBP6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 DEFB134Q4QY38 66 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 PRAMEF20Q5VT98 475 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 LIPJQ5W064 366 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 ANKRD34AQ69YU3 496 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 HIST2H2AA3Q6FI13 130 aa6.49□□□□□ -1.37
PTCHD3P1-201ENST00000612350 NIPAL1Q6NVV3 410 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms