RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 APOBEC4Q8WW27 367 aaKnown RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SLC25A46Q96AG3 418 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 RNF31Q96EP0 1072 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ZBP1Q9H171 429 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 A0A075B6Q4 140 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 B4DXG7 233 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SLC30A4O14863 429 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 FCMRO60667 390 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 KELP23276 732 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 CXCR2P25025 360 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ACADLP28330 430 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 CHRNEQ04844 493 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 QPRTQ15274 297 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 MTFR2Q6P444 385 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SLC39A5Q6ZMH5 540 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF793Q6ZN11 406 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 TP53I13Q8NBR0 393 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 TMEM145Q8NBT3 493 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 BBS10Q8TAM1 723 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 DACT3Q96B18 629 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 NOTCH4Q99466 2003 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 MRPS23Q9Y3D9 190 aaKnown RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ATG4BQ9Y4P1 393 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 COL4A6Q14031 1691 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 TRPM6Q9BX84 2022 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 HEATR5BQ9P2D3 2071 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 FAM240BA0A1B0GVZ2 78 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 AKR7A2O43488 359 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 PDE9AO76083 593 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 MAT2AP31153 395 aaKnown RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 CCR8P51685 355 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 CDH11P55287 796 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 WNT4P56705 351 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 SNRPGP62308 76 aaKnown RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 MLLT11Q13015 90 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 KLHL12Q53G59 568 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 FAM46CQ5VWP2 391 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 LILRA6Q6PI73 481 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 C19orf48Q6RUI8 117 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 LYPD8Q6UX82 237 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 KLBQ86Z14 1044 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 NKAIN4Q8IVV8 208 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 SHISA5Q8N114 240 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 TBC1D19Q8N5T2 526 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 ANKK1Q8NFD2 765 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 OR51G2Q8NGK0 314 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 COQ10AQ96MF6 247 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 OR52A5Q9H2C5 316 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 C3orf14Q9HBI5 128 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 GIMAP4Q9NUV9 329 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 DSPPQ9NZW4 1301 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 PLA2G10O15496 165 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 PIP5K1CO60331 668 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 EPPINO95925 133 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 SLC35G4P0C7Q5 338 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 ADH5P11766 374 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 ETV6P41212 452 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 MC3RP41968 323 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 TATDN3Q17R31 274 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF311Q5JNZ3 666 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 C12orf73Q69YU5 71 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF438Q7Z4V0 828 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 LINC01555Q8NAE3 123 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 CXorf40AQ8TE69 158 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 GANCQ8TET4 914 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 OR2B2Q9GZK3 357 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 TMEM245Q9H330 911 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 NEUROD4Q9HD90 331 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 MAN2C1Q9NTJ4 1040 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 GPSM3Q9Y4H4 160 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 SHISA3A0PJX4 238 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 ISM1B1AKI9 464 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 SRPRAP08240 638 aaKnown RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 PTPN2P17706 415 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 CERS1P27544 350 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 AHRP35869 848 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
COL6A1-207ENST00000612273 DCUN1D3Q8IWE4 304 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 OR2L2Q8NH16 312 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 RGMAQ96B86 450 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 AMDHD1Q96NU7 426 aa13.23□□□□□ -0.29
COL6A1-207ENST00000612273 TCF20Q9UGU0 1960 aaKnown RBP13.22□□□□□ -0.29
COL6A1-207ENST00000612273 LILRB3O75022 631 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 FGBP02675 491 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 MRPL3P09001 348 aaKnown RBP13.22□□□□□ -0.29
COL6A1-207ENST00000612273 PCSK2P16519 638 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SLC9A3P48764 834 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 RPS7P62081 194 aaKnown RBP13.22□□□□□ -0.29
COL6A1-207ENST00000612273 DEFB115Q30KQ5 88 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 CCNJQ5T5M9 372 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 IDNKQ5T6J7 187 aa13.22□□□□□ -0.29
COL6A1-207ENST00000612273 SLC27A4Q6P1M0 643 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms