RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ASPGQ86U10 573 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 AMIGO1Q86WK6 493 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 DTX3Q8N9I9 347 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PLA2G15Q8NCC3 412 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 C7orf57Q8NEG2 295 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HIST1H2ACQ93077 130 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PDXPQ96GD0 296 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PRRC1Q96M27 445 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 OR2M4Q96R27 311 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 COQ7Q99807 217 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 KXD1Q9BQD3 176 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 NDC1Q9BTX1 674 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SGPP1Q9BX95 441 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SAP130Q9H0E3 1048 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ABCG4Q9H172 646 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ZNF226Q9NYT6 803 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ZFR2Q9UPR6 939 aaKnown RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 GRIP1Q9Y3R0 1128 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HCFC2Q9Y5Z7 792 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PDCD11Q14690 1871 aaKnown RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 YY2O15391 372 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PRODHO43272 600 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HCN1O60741 890 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 NDUFV2P19404 249 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HIST1H1TP22492 207 aaPredicted RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 PPP3R1P63098 170 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 RAE1P78406 368 aaKnown RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 ZNF77Q15935 545 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 INAVAQ3KP66 663 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 LRRC25Q8N386 305 aaPredicted RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 OR6K6Q8NGW6 343 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HCAR2Q8TDS4 363 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 TTYH2Q9BSA4 534 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 TTTY10Q9BZA0 68 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 MCUBQ9NWR8 336 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 CSNK1G3Q9Y6M4 447 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 HOXB2P14652 356 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ACSL1P33121 698 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 KCNJ5P48544 419 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 ADAM15Q13444 863 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SLC7A13Q8TCU3 470 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 FKBP10Q96AY3 582 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 TBC1D20Q96BZ9 403 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 C16orf58Q96GQ5 468 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 INSM2Q96T92 566 aaPredicted RBP8.2□□□□□ -1.1
LIG4-204ENST00000611712 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SLC17A9Q9BYT1 436 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 MMP28Q9H239 520 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 EGLN3Q9H6Z9 239 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 MARK1Q9P0L2 795 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SH2B3Q9UQQ2 575 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 SNX11Q9Y5W9 270 aa8.2□□□□□ -1.1
LIG4-204ENST00000611712 A0A1W2PQ09 198 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 PRRT4C9JH25 899 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 RNGTTO60942 597 aaKnown RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 CPNE3O75131 537 aaKnown RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 ZNF3P17036 446 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 ACVR2AP27037 513 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 MAP2K3P46734 347 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 PGDP52209 483 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 METAP1P53582 386 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 FAM83HQ6ZRV2 1179 aaPredicted RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 ACBD7Q8N6N7 88 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 OR2L5Q8NG80 312 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 OR52E1Q8NGJ3 308 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 FANK1Q8TC84 345 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 NEURL2Q9BR09 285 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 PINK1Q9BXM7 581 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 GLIPR2Q9H4G4 154 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 A4GALTQ9NPC4 353 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SAGE1Q9NXZ1 904 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 EXTL2Q9UBQ6 330 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 TBX21Q9UL17 535 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SCN2BO60939 215 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 OR6A2O95222 327 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SCG5P05408 212 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 MLLT11Q13015 90 aaPredicted RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 ITPRIPL2Q3MIP1 535 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 PLBD1Q6P4A8 553 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 VRK2Q86Y07 508 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 CPOQ8IVL8 374 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SLC7A5P1Q8MH63 180 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 OR6T1Q8NGN1 323 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 FGF13Q92913 245 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SAMD8Q96LT4 415 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 TMEM246Q9BRR3 403 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 ACTRT3Q9BYD9 372 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SLIRPQ9GZT3 109 aaKnown RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 POU2F3Q9UKI9 436 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 IKZF2Q9UKS7 526 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 A3GALT2U3KPV4 340 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 MYO16Q9Y6X6 1858 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 ZNF646O15015 1829 aaPredicted RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 CASC3O15234 703 aaKnown RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 PROM1O43490 865 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms