RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 J3QRK9 145 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 M0R129 80 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 POLR1CO15160 346 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SLC22A1O15245 554 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RNF13O43567 381 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CD160O95971 181 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SYPP08247 313 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ADORA3P0DMS8 318 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF41P51814 821 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 QPRTQ15274 297 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PYCR3Q53H96 274 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PLET1Q6UQ28 207 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TMPRSS9Q7Z410 1059 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RBM12BQ8IXT5 1001 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SLC44A3Q8N4M1 653 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CRELD1Q96HD1 420 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM80Q96HE8 168 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ASPNQ9BXN1 380 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PLA2G2FQ9BZM2 168 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PITHD1Q9GZP4 211 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GORASP2Q9H8Y8 452 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NMNAT1Q9HAN9 279 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TCF7L1Q9HCS4 588 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GRHPRQ9UBQ7 328 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 EPHA6Q9UF33 1036 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ABCG2Q9UNQ0 655 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PCDHA9Q9Y5H5 950 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PEX16Q9Y5Y5 336 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RP1P56715 2156 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NCOR1O75376 2440 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C2orf92A0A1B0GVN3 265 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NPIPA5E9PKD4 350 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PSMD9O00233 223 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF195O14628 629 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ACOX3O15254 700 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 B4GAT1O43505 415 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 DENRO43583 198 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 IDH3BO43837 385 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 AK1P00568 194 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 HK1P19367 917 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NAA10P41227 235 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 OR12D2P58182 307 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PLGLB1Q02325 96 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ACY1Q03154 408 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF750Q32MQ0 723 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ATG14Q6ZNE5 492 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 Q6ZS52 159 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 USP43Q70EL4 1123 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 LILRA2Q8N149 483 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 DEFB123Q8N688 67 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ZNF548Q8NEK5 533 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 OR6C4Q8NGE1 309 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 OR8J2Q8NGG1 315 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 OR6N1Q8NGY5 312 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C16orf58Q96GQ5 468 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CNDP2Q96KP4 475 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 KCTD7Q96MP8 289 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CPPED1Q9BRF8 314 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CRB3Q9BUF7 120 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 QRSL1Q9H0R6 528 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TMEM138Q9NPI0 162 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SPHK1Q9NYA1 384 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SERGEFQ9UGK8 458 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NPIPA1Q9UND3 350 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RNF6Q9Y252 685 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 SCN4AP35499 1836 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CDC14CA4D256 554 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ANXA2P2A6NMY6 339 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 EIF1AYO14602 144 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PROM1O43490 865 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PRAMEF2O60811 474 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GPR75O95800 540 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ANXA2P07355 339 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 FURINP09958 794 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C7P10643 843 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 EDNRAP25101 427 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 GSTM2P28161 218 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ARFIP1P53367 373 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 RAB39AQ14964 217 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 XKR7Q5GH72 579 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PIP5KL1Q5T9C9 394 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 FAM111BQ6SJ93 734 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 ERI1Q8IV48 349 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 YIPF7Q8N8F6 280 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CHST4Q8NCG5 386 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 C7orf57Q8NEG2 295 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 OR2AJ1Q8NGZ0 328 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 PIK3R3Q92569 461 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NR4A3Q92570 626 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TANKQ92844 425 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NKD1Q969G9 470 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 CCDC115Q96NT0 180 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 BARD1Q99728 777 aaKnown RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TM9SF2Q99805 663 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TREX2Q9BQ50 279 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-218ENST00000610726 MND1Q9BWT6 205 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 TRPM6Q9BX84 2022 aa6.87□□□□□ -1.31
CSDE1-218ENST00000610726 NANSQ9NR45 359 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms