RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 POMT2Q9UKY4 750 aa11.27□□□□□ -0.6
TP53-220ENST00000610623 COPS3Q9UNS2 423 aa11.27□□□□□ -0.6
TP53-220ENST00000610623 EXOSC1Q9Y3B2 195 aaKnown RBP11.27□□□□□ -0.6
TP53-220ENST00000610623 PCDHGC4Q9Y5F7 938 aa11.27□□□□□ -0.6
TP53-220ENST00000610623 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 EIF1AYO14602 144 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 ABCD4O14678 606 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 LANCL1O43813 399 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 CLDN11O75508 207 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 SOX14O95416 240 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 UGT2B7P16662 529 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 ITPKAP23677 461 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 RBMS1P29558 406 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 CHI3L1P36222 383 aaPredicted RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 CCL23P55773 120 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 RPL6Q02878 288 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 EEF1A2Q05639 463 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 ACSM2AQ08AH3 577 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 C2orf80Q0P641 193 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 COX10Q12887 443 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 ACSM2BQ68CK6 577 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 TRIM40Q6P9F5 258 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 SLC39A5Q6ZMH5 540 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 C3P1Q6ZMU1 363 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 RASSF6Q6ZTQ3 369 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 WDR53Q7Z5U6 358 aaPredicted RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 SLC30A8Q8IWU4 369 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 OR5T2Q8NGG2 359 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 CDC26Q8NHZ8 85 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 WDR48Q8TAF3 677 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 SIPA1Q96FS4 1042 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 TRMT2BQ96GJ1 504 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 AHCYL2Q96HN2 611 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 ACTR6Q9GZN1 396 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 C1GALT1Q9NS00 363 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 SEMA3GQ9NS98 782 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 IMP3Q9NV31 184 aaKnown RBP11.27□□□□□ -0.61
TP53-220ENST00000610623 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 RHCGQ9UBD6 479 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 PFDN2Q9UHV9 154 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 CBLCQ9ULV8 474 aa11.27□□□□□ -0.61
TP53-220ENST00000610623 A0A0D9SEW6 157 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 TRBV4-1A0A0J9YWV2 114 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 FAAHO00519 579 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 SLC28A2O43868 658 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ABLIM3O94929 683 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 SOD2P04179 222 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 HMGN1P05114 100 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ACP2P11117 423 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 JUPP14923 745 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 GALP22466 123 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 PITPNBP48739 271 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 HNMTP50135 292 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 PTPN5P54829 565 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 PCBP3P57721 371 aaKnown RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 CRYZQ08257 329 aaKnown RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 MAP4K2Q12851 820 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 OPCMLQ14982 345 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 GSG1Q2KHT4 349 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 XKR6Q5GH73 641 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 DCST1Q5T197 706 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 UNC5DQ6UXZ4 953 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 MACC1Q6ZN28 852 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 FTMTQ8N4E7 242 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 CLRN3Q8NCR9 226 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ZNF461Q8TAF7 563 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 C11orf24Q96F05 449 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 ZNF582Q96NG8 517 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 TEFMQ96QE5 360 aaKnown RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 BOCQ9BWV1 1114 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ZNF275Q9NSD4 429 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 SLC39A1Q9NY26 324 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ANGPT4Q9Y264 503 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 LTBP2Q14767 1821 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 LOC105369274A0A096LPK9 316 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 UPK3BL1B0FP48 263 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 UPK3BL2E5RIL1 263 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 FFAR1O14842 300 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 KDELR3O43731 214 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 OR10H3O60404 316 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 NCR1O76036 304 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 F11P03951 625 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 IGFBP1P08833 259 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 HMGA1P17096 107 aaKnown RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 IDSP22304 550 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 MAOBP27338 520 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 DGKGP49619 791 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
TP53-220ENST00000610623 GAS1P54826 345 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 ERVK-21P61565 698 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 GNA13Q14344 377 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 SEC23BQ15437 767 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 LYPLAL1Q5VWZ2 237 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 KIAA1211LQ6NV74 962 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 WASH2PQ6VEQ5 465 aa11.26□□□□□ -0.61
TP53-220ENST00000610623 MARCH9Q86YJ5 346 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms