RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CPMP14384 443 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 NUDT1P36639 197 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 MLLT10P55197 1068 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 SNRPGP62308 76 aaKnown RBP26.28■■□□□ 1.8
CSPG5-205ENST00000610462 ALDH6A1Q02252 535 aaKnown RBP26.28■■□□□ 1.8
CSPG5-205ENST00000610462 CD300LDQ6UXZ3 194 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 VRK2Q86Y07 508 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 NR4A3Q92570 626 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 PTGFRNQ9P2B2 879 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 SLC13A4Q9UKG4 626 aa26.28■■□□□ 1.8
CSPG5-205ENST00000610462 H3BN98 237 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 TPST2O60704 377 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 POU3F3P20264 500 aaPredicted RBP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 COX10Q12887 443 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 IRF3Q14653 427 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 NDUFA9Q16795 377 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 SYT13Q7L8C5 426 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 WDR53Q7Z5U6 358 aaPredicted RBP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 ZBTB46Q86UZ6 589 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 MORN4Q8NDC4 146 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 OR4K5Q8NGD3 323 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 ZG16BQ96DA0 208 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 SCN2AQ99250 2005 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 A0A1W2PPC4 97 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 ZNF860A6NHJ4 632 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 M0R082 166 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 MBTPS2O43462 519 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 TP53P04637 393 aaPredicted RBP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 PORP16435 677 aaPredicted RBP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 BMXP51813 675 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 VBP1P61758 197 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 LSM3P62310 102 aaKnown RBP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 SLC16A11Q8NCK7 471 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 NDNFQ8TB73 568 aa26.27■■□□□ 1.8
CSPG5-205ENST00000610462 TRIM45Q9H8W5 580 aaPredicted RBP26.27■■□□□ 1.8
CSPG5-205ENST00000610462 TDRD6O60522 2096 aaKnown RBP26.26■■□□□ 1.79
CSPG5-205ENST00000610462 hCG_2014768A0A024R1R8 64 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 M0R3G1 203 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 CHRNB1P11230 501 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 MMP11P24347 488 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 PDX1P52945 283 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 TIGD6Q17RP2 521 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 PRSS41Q7RTY9 318 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 ZER1Q7Z7L7 766 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 OOSP2Q86WS3 158 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 ZNF675Q8TD23 568 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 CRELD1Q96HD1 420 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 SLC2A4RGQ9NR83 387 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 GALNT8Q9NY28 637 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 SPACA6W5XKT8 324 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 OR5K3A6NET4 321 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 ZIC2O95409 532 aaPredicted RBP26.26■■□□□ 1.79
CSPG5-205ENST00000610462 PRKAR1BP31321 381 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 LIPAP38571 399 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 C1orf61Q13536 156 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 INAVAQ3KP66 663 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 C1orf94Q6P1W5 598 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 IQCHQ86VS3 1027 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 TMEFF1Q8IYR6 380 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 C9orf43Q8TAL5 461 aaPredicted RBP26.26■■□□□ 1.79
CSPG5-205ENST00000610462 TRUB1Q8WWH5 349 aaKnown RBP26.26■■□□□ 1.79
CSPG5-205ENST00000610462 CDS1Q92903 461 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 KLHDC7BQ96G42 594 aa26.26■■□□□ 1.79
CSPG5-205ENST00000610462 ADORA3P0DMS8 318 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 SRFP11831 508 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 ALDH4A1P30038 563 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 BLKP51451 505 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 HHEXQ03014 270 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 SMAD4Q13485 552 aaKnown RBP26.25■■□□□ 1.79
CSPG5-205ENST00000610462 ZNF628Q5EBL2 1059 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 TMEM201Q5SNT2 666 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 KLHL35Q6PF15 583 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 CASP12Q6UXS9 341 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 ZNF761Q86XN6 746 aaPredicted RBP26.25■■□□□ 1.79
CSPG5-205ENST00000610462 RBM12BQ8IXT5 1001 aaKnown RBP26.25■■□□□ 1.79
CSPG5-205ENST00000610462 CSNK1A1LQ8N752 337 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 OR52P1PQ8NH57 321 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 IL4I1Q96RQ9 567 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 ORAI3Q9BRQ5 295 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 IL21RQ9HBE5 538 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 SLC25A19Q9HC21 320 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 CTPS2Q9NRF8 586 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 GPR55Q9Y2T6 319 aaPredicted RBP26.25■■□□□ 1.79
CSPG5-205ENST00000610462 CHST2Q9Y4C5 530 aa26.25■■□□□ 1.79
CSPG5-205ENST00000610462 FCMRO60667 390 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 SOX18P35713 384 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 SLC15A1P46059 708 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 TAS2R41P59536 307 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 PPP1CAP62136 330 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 SYT16Q17RD7 645 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 FRRS1Q6ZNA5 592 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 SLCO6A1Q86UG4 719 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 ZDHHC1Q8WTX9 485 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 SLC9A6Q92581 669 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 Q96MT0 163 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 C2orf42Q9NWW7 574 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 CHURC1-FNTBB4DL54 471 aa26.24■■□□□ 1.79
CSPG5-205ENST00000610462 PIPP12273 146 aaPredicted RBP26.24■■□□□ 1.79
CSPG5-205ENST00000610462 OCA2Q04671 838 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms