RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PDE7AQ13946 482 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 OR8K5Q8NH50 307 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 MAGEB10Q96LZ2 347 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-216ENST00000610401 ZSWIM3Q96MP5 696 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 TEFMQ96QE5 360 aaKnown RBP19.23■□□□□ 0.67
SSBP3-216ENST00000610401 KLHL31Q9H511 634 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 SLC13A4Q9UKG4 626 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 TRAPPC4Q9Y296 219 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 SOCS6O14544 535 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 ARHGEF9O43307 516 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 TP53P04637 393 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-216ENST00000610401 WASP42768 502 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 SNRPGP62308 76 aaKnown RBP19.23■□□□□ 0.67
SSBP3-216ENST00000610401 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.23■□□□□ 0.67
SSBP3-216ENST00000610401 CAMK1Q14012 370 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 E2F2Q14209 437 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 TCEAL8Q8IYN2 117 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF624Q9P2J8 865 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-216ENST00000610401 A0A087WUU8 490 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 MAGEB4O15481 346 aaPredicted RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 PIP5K1CO60331 668 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 TOXO94900 526 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 HMGN2P05204 90 aaKnown RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 CHRM4P08173 479 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF30P17039 623 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 RPS7P62081 194 aaKnown RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 KHDRBS2Q5VWX1 349 aaKnown RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 C12orf73Q69YU5 71 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 SETD6Q8TBK2 473 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 SPRYD4Q8WW59 207 aaPredicted RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 SIRT3Q9NTG7 399 aaPredicted RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 NKIRAS2Q9NYR9 191 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 ALPK3Q96L96 1907 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 DSPPQ9NZW4 1301 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 TNFRSF10AO00220 468 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 ALX3O95076 343 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 PCCBP05166 539 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 IRS1P35568 1242 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 MRPL28Q13084 256 aaKnown RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 NDUFAF5Q5TEU4 345 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 FAM205BPQ63HN1 556 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 NKAIN4Q8IVV8 208 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 SIMC1Q8NDZ2 872 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 NEURL3Q96EH8 262 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 EXTL2Q9UBQ6 330 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 PPIL1Q9Y3C6 166 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 CACNA1IQ9P0X4 2223 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 CNTRLQ7Z7A1 2325 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 A0A0B4J203 849 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 REM1O75628 298 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 CPN2P22792 545 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF805Q5CZA5 627 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 C9orf64Q5T6V5 341 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 ZDHHC20Q5W0Z9 365 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 DPH7Q9BTV6 452 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 GLIPR2Q9H4G4 154 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 IMP3Q9NV31 184 aaKnown RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 MRPL15Q9P015 296 aaKnown RBP19.22■□□□□ 0.67
SSBP3-216ENST00000610401 KCND3Q9UK17 655 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 MAPRE3Q9UPY8 281 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 SLC9A8Q9Y2E8 581 aa19.22■□□□□ 0.67
SSBP3-216ENST00000610401 LAMA1P25391 3075 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 CXCL14O95715 111 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 PPP2R1BP30154 601 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 OR10A3P58181 314 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 ASAH1Q13510 395 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF689Q96CS4 500 aaPredicted RBP19.21■□□□□ 0.67
SSBP3-216ENST00000610401 DEFB118Q96PH6 123 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 DDX31Q9H8H2 851 aaKnown RBP19.21■□□□□ 0.67
SSBP3-216ENST00000610401 SPHK2Q9NRA0 654 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 SRRDQ9UH36 339 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 DOCK9Q9BZ29 2069 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 LOC105369274A0A096LPK9 316 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 IQCMA0A1B0GVH7 501 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 OLFM2O95897 454 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 LIMS3P0CW19 117 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 LIMS4P0CW20 117 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 ALAS2P22557 587 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 SSTR2P30874 369 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 DUSP2Q05923 314 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 YIF1BQ5BJH7 314 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 ESPNLQ6ZVH7 1005 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 OR4N4Q8N0Y3 316 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 KRT78Q8N1N4 520 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 APOBEC4Q8WW27 367 aaKnown RBP19.21■□□□□ 0.67
SSBP3-216ENST00000610401 DHRS1Q96LJ7 313 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 ZFP3Q96NJ6 502 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 QRFPRQ96P65 431 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 LGR4Q9BXB1 951 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 MAN2C1Q9NTJ4 1040 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 SLC23A1Q9UHI7 598 aa19.21■□□□□ 0.67
SSBP3-216ENST00000610401 EPPINO95925 133 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 IL1AP01583 271 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 PRKAR1AP10644 381 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 ARPC4P59998 168 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 MEDAGQ5VYS4 303 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 CRIPAKQ8N1N5 446 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 KREMEN2Q8NCW0 462 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 TIFAQ96CG3 184 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 COQ7Q99807 217 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms