RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SERPINB9P50453 376 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 DCAF7P61962 342 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 ADAM8P78325 824 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 SRYQ05066 204 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 SNTA1Q13424 505 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 LTB4RQ15722 352 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 LETMD1Q6P1Q0 360 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 CAMKMTQ7Z624 323 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 C1orf52Q8N6N3 182 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 OR14L1PQ8NHC6 308 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 ZNF483Q8TF39 744 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 KLHL29Q96CT2 875 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 CNRIP1Q96F85 164 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 ALPK1Q96QP1 1244 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 PAFAH2Q99487 392 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 MRPL57Q9BQC6 102 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 TUBA1CQ9BQE3 449 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 GSX1Q9H4S2 264 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 BRF2Q9HAW0 419 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 NMRK1Q9NWW6 199 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 PRODH2Q9UF12 536 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 ZNF225Q9UK10 706 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 SNX6Q9UNH7 406 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 ZNF780BQ9Y6R6 833 aa12.18□□□□□ -0.46
POLR2J3-219ENST00000608621 PRAMEF25A6NGN4 478 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 TO15178 435 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 REM1O75628 298 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 RAF1P04049 648 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 PCSK2P16519 638 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 HSD17B3P37058 310 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 STARP49675 285 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 TRA2BP62995 288 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 MRPS35P82673 323 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 SORDQ00796 357 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 TEX35Q5T0J7 233 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 ENPP6Q6UWR7 440 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 PLXDC2Q6UX71 529 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 PAMR1Q6UXH9 720 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 LUZP2Q86TE4 346 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 RELL1Q8IUW5 271 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 CCDC116Q8IYX3 515 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 TMEM151AQ8N4L1 468 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 TMBIM1Q969X1 311 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 HBEGFQ99075 208 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 FAIM2Q9BWQ8 316 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 RBM24Q9BX46 236 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 OR2B2Q9GZK3 357 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 MRPL46Q9H2W6 279 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 PLEKHF2Q9H8W4 249 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 PFDN4Q9NQP4 134 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 HEY2Q9UBP5 337 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 VPS29Q9UBQ0 182 aa12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 GPR55Q9Y2T6 319 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 ZNF469Q96JG9 3925 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-219ENST00000608621 FRG2CA6NGY1 282 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 A8MT66 165 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 TRIM49D1C9J1S8 452 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 H0Y3Z8 333 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 NME6O75414 186 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 ERN1O75460 977 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 RCBTB2O95199 551 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 ESRRBO95718 433 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 HOXB4P17483 251 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 HMGCS1Q01581 520 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 CKAP4Q07065 602 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 KEAP1Q14145 624 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 DEFB113Q30KQ7 82 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 TCHHL1Q5QJ38 904 aaPredicted RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 TAOK1Q7L7X3 1001 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 ADGRE4PQ86SQ3 457 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 PLCZ1Q86YW0 608 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 UHMK1Q8TAS1 419 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 DCAKDQ8WVC6 231 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 WNT2BQ93097 391 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 INTS12Q96CB8 462 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 TMCO6Q96DC7 493 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 TM9SF2Q99805 663 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 YIPF4Q9BSR8 244 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 C1QTNF3Q9BXJ4 246 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 DLL4Q9NR61 685 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 TRPS1Q9UHF7 1281 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 DMGDHQ9UI17 866 aaKnown RBP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 UTS2RQ9UKP6 389 aa12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
POLR2J3-219ENST00000608621 OR6C70A6NIJ9 312 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 CLCA1A8K7I4 914 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 MANBAO00462 879 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 BCAS2O75934 225 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 SUPT7LO94864 414 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 ATE1O95260 518 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 CHN1P15882 459 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 SRD5A2P31213 254 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 GFRA1P56159 465 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 CLCQ05315 142 aa12.15□□□□□ -0.46
POLR2J3-219ENST00000608621 POU4F3Q15319 338 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms