RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 OLIG3Q7RTU3 272 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 OR52R1Q8NGF1 315 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 APOBEC4Q8WW27 367 aaKnown RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 PTCHD1Q96NR3 888 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ZNF300Q96RE9 604 aaPredicted RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 STACQ99469 402 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 RSPO3Q9BXY4 272 aaPredicted RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 SLC7A5P2Q9GIP4 190 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 REEP1Q9H902 201 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 SIDT1Q9NXL6 827 aaKnown RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 IFT80Q9P2H3 777 aaPredicted RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 PCDHGB3Q9Y5G1 929 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 A8MVJ9 347 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ALPLP05186 524 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ACP1P24666 158 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 MAP3K8P41279 467 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 TRA2AQ13595 282 aaKnown RBP eCLIP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 PUM1Q14671 1186 aaKnown RBP eCLIP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ARHGAP11BQ3KRB8 267 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ARHGAP40Q5TG30 622 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 QSOX2Q6ZRP7 698 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 HS3ST5Q8IZT8 346 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 C7orf57Q8NEG2 295 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 NRBF2Q96F24 287 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ZNF354BQ96LW1 612 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 ZNF578Q96N58 590 aaPredicted RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 NR1H4Q96RI1 486 aaPredicted RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 RBM4BQ9BQ04 359 aaKnown RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 RBM4Q9BWF3 364 aaKnown RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 OSBPL10Q9BXB5 764 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 AMBRA1Q9C0C7 1298 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 C11orf16Q9NQ32 467 aa20.13■□□□□ 0.81
USP6NL-204ENST00000606752 SMPD3Q9NY59 655 aaPredicted RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 SAMHD1Q9Y3Z3 626 aaKnown RBP20.13■□□□□ 0.81
USP6NL-204ENST00000606752 DSPPQ9NZW4 1301 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 SOX30O94993 753 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 RECKO95980 971 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 HPRP00739 348 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 IFNW1P05000 195 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 IFNA16P05015 189 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 FPR1P21462 350 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 HPCAP84074 193 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 CHRNEQ04844 493 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 MLIPQ5VWP3 458 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 MARVELD2Q8N4S9 558 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 TFAP2CQ92754 450 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 ATOH1Q92858 354 aaPredicted RBP20.12■□□□□ 0.81
USP6NL-204ENST00000606752 USE1Q9NZ43 259 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 FAM32AQ9Y421 112 aaKnown RBP20.12■□□□□ 0.81
USP6NL-204ENST00000606752 ENPP4Q9Y6X5 453 aa20.12■□□□□ 0.81
USP6NL-204ENST00000606752 ADAMDEC1O15204 470 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 PDX1P52945 283 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 PPP2R2BQ00005 443 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 ZFP36L1Q07352 338 aaKnown RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 DUSP8Q13202 625 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 ZNF267Q14586 743 aaPredicted RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 BPHLQ86WA6 291 aaPredicted RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 CHDHQ8NE62 594 aaPredicted RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 HOXB13Q92826 284 aaPredicted RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 SMURF2Q9HAU4 748 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 MKKSQ9NPJ1 570 aaPredicted RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 SATB2Q9UPW6 733 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 KMT2EQ8IZD2 1858 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 AGRPO00253 132 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 PRKACGP22612 351 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 RRM2P31350 389 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 CSTF2P33240 577 aaKnown RBP eCLIP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 MERTKQ12866 999 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 PDK3Q15120 406 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 MINDY4Q4G0A6 757 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 SDF2Q99470 211 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 EPYCQ99645 322 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 MTHFD2LQ9H903 347 aaPredicted RBP20.11■□□□□ 0.81
USP6NL-204ENST00000606752 FTSJ1Q9UET6 329 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 ADAMTS20P59510 1910 aa20.11■□□□□ 0.81
USP6NL-204ENST00000606752 FRYLO94915 3013 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 IGKV3D-11A0A0A0MRZ8 115 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 FCMRO60667 390 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 SCRG1O75711 98 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 DNAJB5O75953 348 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 ZNF806P0C7X5 589 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 RHCEP18577 417 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 TNNI3P19429 210 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 SSTR4P31391 388 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 EMDP50402 254 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 FUT7Q11130 342 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 VWA2Q5GFL6 755 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 MFSD4BQ5TF39 518 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 PWWP2BQ6NUJ5 590 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 PPP1R3BQ86XI6 285 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 COX18Q8N8Q8 333 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 GPR151Q8TDV0 419 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 RDH12Q96NR8 316 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 PIP5K1AQ99755 562 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 ADI1Q9BV57 179 aa20.1■□□□□ 0.81
USP6NL-204ENST00000606752 HRKO00198 91 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 NKX2-2O95096 273 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 ZIC2O95409 532 aaPredicted RBP20.09■□□□□ 0.81
USP6NL-204ENST00000606752 TIAF1O95411 115 aa20.09■□□□□ 0.81
USP6NL-204ENST00000606752 AK1P00568 194 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms