RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 EXOC3L2Q2M3D2 409 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 STRIP1Q5VSL9 837 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 LEMD1Q68G75 181 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SLC30A6Q6NXT4 461 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 FAHD2BQ6P2I3 314 aaPredicted RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 CES3Q6UWW8 571 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SLC39A5Q6ZMH5 540 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF813Q6ZN06 617 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 ABHD13Q7L211 337 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 ANKRD33Q7Z3H0 272 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 TECPR1Q7Z6L1 1165 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 RDH13Q8NBN7 331 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 OR5D18Q8NGL1 313 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 OR2G2Q8NGZ5 317 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM174Q8WUU8 243 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 PIH1D2Q8WWB5 315 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 GJA10Q969M2 543 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 FAHD2AQ96GK7 314 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 LCORQ96JN0 433 aaPredicted RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 GFM1Q96RP9 751 aaKnown RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 CNN2Q99439 309 aaKnown RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 BARX1Q9HBU1 254 aaPredicted RBP8.4□□□□□ -1.07
COMMD3-215ENST00000602574 SLC6A13Q9NSD5 602 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM184CQ9NVA4 438 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 USP3Q9Y6I4 520 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 CLCA3PQ9Y6N3 262 aa8.4□□□□□ -1.07
COMMD3-215ENST00000602574 ITGB4P16144 1822 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ARFGEF1Q9Y6D6 1849 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 C5orf51A6NDU8 294 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM200CA6NKL6 621 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 FAM159BA6NKW6 160 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ERI2A8K979 691 aaKnown RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 STK25O00506 426 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 NME4O00746 187 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 CXCL11O14625 94 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PMM2O15305 246 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 COCHO43405 550 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 LZTS3O60299 673 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PAPLNO95428 1278 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SGPL1O95470 568 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PNPP00491 289 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ALDOCP09972 364 aaKnown RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF14P17017 642 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 CERS1P27544 350 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PIGAP37287 484 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SLC1A2P43004 574 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 GPR15P49685 360 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PPT1P50897 306 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ACLYP53396 1101 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 AP3S2P59780 193 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SELENOVP59797 346 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 LCP2Q13094 533 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TRA2AQ13595 282 aaKnown RBP eCLIP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 GAMTQ14353 236 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ISXQ2M1V0 245 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 MOGAT2Q3SYC2 334 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PLA1AQ53H76 456 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ARHGAP15Q53QZ3 475 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF311Q5JNZ3 666 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ZDHHC20Q5W0Z9 365 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TSSK4Q6SA08 328 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SPESP1Q6UW49 350 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 GDPD4Q6W3E5 623 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 AHSA2Q719I0 299 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ARMCX2Q7L311 632 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 MYPOPQ86VE0 399 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM200AQ86VY9 491 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 CEP97Q8IW35 865 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 LAX1Q8IWV1 398 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 RHOT1Q8IXI2 618 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 UBAC2Q8NBM4 344 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 CPT1CQ8TCG5 803 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TBCKQ8TEA7 893 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SDR42E1Q8WUS8 393 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SLC35F5Q8WV83 523 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 POP5Q969H6 163 aaKnown RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TCTN2Q96GX1 697 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PIGQQ9BRB3 760 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 DDA1Q9BW61 102 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 GLIS2Q9BZE0 524 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 IL22Q9GZX6 179 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 PCED1AQ9H1Q7 454 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 EIF2B3Q9NR50 452 aaKnown RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 SPHK2Q9NRA0 654 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 MTMR10Q9NXD2 777 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TRMT112Q9UI30 125 aaKnown RBP8.39□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF225Q9UK10 706 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 IKZF3Q9UKT9 509 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 IRAK3Q9Y616 596 aa8.39□□□□□ -1.07
COMMD3-215ENST00000602574 TRAV19A0A0A6YYK7 116 aa8.38□□□□□ -1.07
COMMD3-215ENST00000602574 LRIT2A6NDA9 550 aa8.38□□□□□ -1.07
COMMD3-215ENST00000602574 H3BRB1 525 aa8.38□□□□□ -1.07
COMMD3-215ENST00000602574 IGF2P01344 180 aa8.38□□□□□ -1.07
COMMD3-215ENST00000602574 PRKCGP05129 697 aa8.38□□□□□ -1.07
COMMD3-215ENST00000602574 C8GP07360 202 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms