RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 NSL1Q96IY1 281 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 CNTNAP3BQ96NU0 1288 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 ANKRD27Q96NW4 1050 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 GAL3ST4Q96RP7 486 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 CPPED1Q9BRF8 314 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 GPATCH1Q9BRR8 931 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 ACTRT3Q9BYD9 372 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 CNTNAP3Q9BZ76 1288 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 NXF5Q9H1B4 397 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 IKZF5Q9H5V7 419 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 PRORYQ9H606 182 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 GIN1Q9NXP7 522 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
CHMP2A-206ENST00000600118 TPRP12270 2363 aaKnown RBP11.71□□□□□ -0.54
CHMP2A-206ENST00000600118 FRG2CA6NGY1 282 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 TO15178 435 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 MAN1A2O60476 641 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 ZNF354AO60765 605 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 NADKO95544 446 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 ITGB2P05107 769 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 KRT16P08779 473 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 GPX2P18283 190 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CALB2P22676 271 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CHI3L1P36222 383 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CPA2P48052 419 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CCL11P51671 97 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CORO7P57737 925 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 TXNL4AP83876 142 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CAPRIN1Q14444 709 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 DUSP5Q16690 384 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 PIGGQ5H8A4 983 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CRB2Q5IJ48 1285 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 COX20Q5RI15 118 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 FCRLBQ6BAA4 426 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 BORAQ6PGQ7 559 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 LYPD8Q6UX82 237 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 WDR53Q7Z5U6 358 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 RNF130Q86XS8 419 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 FDCSPQ8NFU4 85 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 THAP3Q8WTV1 239 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CRELD1Q96HD1 420 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 LCORQ96JN0 433 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC35G5Q96KT7 338 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 STACQ99469 402 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC39A3Q9BRY0 314 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 YIPF4Q9BSR8 244 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CDCP1Q9H5V8 836 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 ZNF552Q9H707 407 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 LIN28AQ9H9Z2 209 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 IL1RL2Q9HB29 575 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 EQTNQ9NQ60 294 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 DUSP22Q9NRW4 184 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 GID8Q9NWU2 228 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 GPR83Q9NYM4 423 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 FAF1Q9UNN5 650 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
CHMP2A-206ENST00000600118 A6NL46 340 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 A8MUI8 341 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 WWP2O00308 870 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 CDK2AP1O14519 115 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 ACOX3O15254 700 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 ASNA1O43681 348 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 SOX30O94993 753 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 BMP2P12643 396 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 MATN1P21941 496 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 PPIBP23284 216 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC6A2P23975 617 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 TRHRP34981 398 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 NUDT2P50583 147 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 MNAT1P51948 309 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 PSPHP78330 225 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 SELPLGQ14242 412 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 RGNQ15493 299 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 ZNHIT3Q15649 155 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 CYP27C1Q4G0S4 372 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 ACER2Q5QJU3 275 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 IRAK1BP1Q5VVH5 260 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 HLA-DQA1Q5Y7H0 255 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 NANOGP8Q6NSW7 305 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC44A2Q8IWA5 706 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 C10orf111Q8N326 155 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC15A4Q8N697 577 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 HORMAD2Q8N7B1 307 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 OR8J3Q8NGG0 315 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 FBXO27Q8NI29 283 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 FBXO30Q8TB52 745 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 PNPT1Q8TCS8 783 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 HSPBAP1Q96EW2 488 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 SLC35A4Q96G79 324 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 ZNF354BQ96LW1 612 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 OR7D2Q96RA2 312 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 RASL10BQ96S79 203 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 HOPXQ9BPY8 73 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
CHMP2A-206ENST00000600118 PIGUQ9H490 435 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms