RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SDR39U1Q9NRG7 319 aaPredicted RBP12.66□□□□□ -0.38
IRF3-225ENST00000600022 VPS29Q9UBQ0 182 aa12.66□□□□□ -0.38
IRF3-225ENST00000600022 PPIEQ9UNP9 301 aaKnown RBP12.66□□□□□ -0.38
IRF3-225ENST00000600022 ERVK-11Q9UQG0 969 aa12.66□□□□□ -0.38
IRF3-225ENST00000600022 POLR3HQ9Y535 204 aaPredicted RBP12.66□□□□□ -0.38
IRF3-225ENST00000600022 EML6Q6ZMW3 1958 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 LRIT2A6NDA9 550 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 NR5A2O00482 541 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 CDK2AP1O14519 115 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 AIM2O14862 343 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 CIB2O75838 187 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 ALDOCP09972 364 aaKnown RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 GPX3P22352 226 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 DNAJA1P31689 397 aaKnown RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 ADH7P40394 386 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 SOX3P41225 446 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 NUDT2P50583 147 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 SSR4P51571 173 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 NEK2P51955 445 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 PLA2G16P53816 162 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 IST1P53990 364 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 HMGCS1Q01581 520 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 SPIN4Q56A73 249 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 IL23RQ5VWK5 629 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 TMEM211Q6ICI0 200 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 GLB1L3Q8NCI6 653 aaPredicted RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 RBM15BQ8NDT2 890 aaKnown RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 TRPV3Q8NET8 790 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 PTPMT1Q8WUK0 201 aaPredicted RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 ASB5Q8WWX0 329 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 VMP1Q96GC9 406 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 MTERF1Q99551 399 aaKnown RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 CENPKQ9BS16 269 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 ASIC5Q9NY37 505 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 TAS2R1Q9NYW7 299 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 GIMAP2Q9UG22 337 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 MAPRE3Q9UPY8 281 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 YARS2Q9Y2Z4 477 aaKnown RBP12.65□□□□□ -0.38
IRF3-225ENST00000600022 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 FAM215AQ9Y5M1 114 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 GPR45Q9Y5Y3 372 aa12.65□□□□□ -0.38
IRF3-225ENST00000600022 NAV3Q8IVL0 2385 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 FAM234BA2RU67 622 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ANKDD1BA6NHY2 528 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 CYR61O00622 381 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ERI3O43414 337 aaKnown RBP12.64□□□□□ -0.39
IRF3-225ENST00000600022 ZFAND5O76080 213 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 GLSO94925 669 aaPredicted RBP12.64□□□□□ -0.39
IRF3-225ENST00000600022 SEMA3DO95025 777 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 NADKO95544 446 aaPredicted RBP12.64□□□□□ -0.39
IRF3-225ENST00000600022 GLI4P10075 376 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 MAGEA5P43359 124 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 CLNS1AP54105 237 aaKnown RBP12.64□□□□□ -0.39
IRF3-225ENST00000600022 NME5P56597 212 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 PLGLB1Q02325 96 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ID2Q02363 134 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ACSM2AQ08AH3 577 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 SLC13A2Q13183 592 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ACSM2BQ68CK6 577 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ZNF585AQ6P3V2 769 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 PAOXQ6QHF9 649 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 CYP20A1Q6UW02 462 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 GK5Q6ZS86 529 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 TMEM200AQ86VY9 491 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 OR5M3Q8NGP4 307 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 OR10Q1Q8NGQ4 319 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 DOK4Q8TEW6 326 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 RCN3Q96D15 328 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 FCRL1Q96LA6 429 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 RASL10BQ96S79 203 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ZNF559Q9BR84 538 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 TTYH2Q9BSA4 534 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 DPY30Q9C005 99 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 ZDHHC11Q9H8X9 412 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 CLK4Q9HAZ1 481 aaKnown RBP12.64□□□□□ -0.39
IRF3-225ENST00000600022 GID8Q9NWU2 228 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 AHSPQ9NZD4 102 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 MYOTQ9UBF9 498 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 Q9UFV3 132 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 MMACHCQ9Y4U1 282 aa12.64□□□□□ -0.39
IRF3-225ENST00000600022 CCDC154A6NI56 674 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 A8MVJ9 347 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 GSC2O15499 205 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 CLEC3AO75596 197 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 ETHE1O95571 254 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 PTX3P26022 381 aaPredicted RBP12.63□□□□□ -0.39
IRF3-225ENST00000600022 CERS1P27544 350 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 DNASE1L1P49184 302 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 POLR2JP52435 117 aaKnown RBP12.63□□□□□ -0.39
IRF3-225ENST00000600022 DIO3P55073 304 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 RPS13P62277 151 aaKnown RBP12.63□□□□□ -0.39
IRF3-225ENST00000600022 SKP1P63208 163 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 KCNJ2P63252 427 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 FOXO1Q12778 655 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms