RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 PNCKQ6P2M8 343 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 FITM2Q8N6M3 262 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 OR51A7Q8NH64 312 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 FNDC8Q8TC99 324 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 SRA1Q9HD15 236 aaKnown RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 ATP13A2Q9NQ11 1180 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 SLC7A7Q9UM01 511 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 MRPS2Q9Y399 296 aaKnown RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 ROBO1Q9Y6N7 1651 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 KLRC4-KLRK1H3BQV0 150 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 ERP29P30040 261 aaKnown RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 CDK3Q00526 305 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 ZNF169Q14929 603 aaPredicted RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 RTL6Q6ICC9 239 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 ERMP1Q7Z2K6 904 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 SYNPOQ8N3V7 929 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 C12orf65Q9H3J6 166 aaKnown RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 FAM118AQ9NWS6 357 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 PTBP2Q9UKA9 531 aaKnown RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 NDUFB2O95178 105 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 ZNF648Q5T619 568 aaPredicted RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 DCAF12L1Q5VU92 463 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 EGFLAMQ63HQ2 1017 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 TMED4Q7Z7H5 227 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 HS3ST5Q8IZT8 346 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 CANT1Q8WVQ1 401 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 TBC1D20Q96BZ9 403 aa19.43■□□□□ 0.7
UPF1-207ENST00000599848 FARSAQ9Y285 508 aaKnown RBP19.43■□□□□ 0.7
UPF1-207ENST00000599848 C13orf42A0A1B0GVH6 325 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 DLGAP1O14490 977 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 SOCS2O14508 198 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 ITGB2P05107 769 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 IDUAP35475 653 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 KCTD19Q17RG1 926 aaPredicted RBP19.42■□□□□ 0.7
UPF1-207ENST00000599848 ODF4Q2M2E3 257 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 TECRLQ5HYJ1 363 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 FAM76BQ5HYJ3 339 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 C15orf39Q6ZRI6 1047 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 HPS1Q92902 700 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 TWSG1Q9GZX9 223 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 SARDHQ9UL12 918 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 OAZ3Q9UMX2 235 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 PTGESO14684 152 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 HK3P52790 923 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 DEFB103AP81534 67 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 OR52N2Q8NGI0 321 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 ECHDC3Q96DC8 303 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 SPIN2AQ99865 258 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 MICU1Q9BPX6 476 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 SPIN2BQ9BPZ2 258 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 CDC14CA4D256 554 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 ZSCAN5BA6NJL1 495 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 SHOX2O60902 331 aaPredicted RBP19.42■□□□□ 0.7
UPF1-207ENST00000599848 HPRP00739 348 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 SLC26A5P58743 744 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 XKR5Q6UX68 686 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 PHF7Q9BWX1 381 aaPredicted RBP19.42■□□□□ 0.7
UPF1-207ENST00000599848 ZDHHC5Q9C0B5 715 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 TSPAN9O75954 239 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 CDK2P24941 298 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 XCR1P46094 333 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 ZNF81P51508 661 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 RHDQ02161 417 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 CMTM1Q8IZ96 169 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 ZNF384Q8TF68 577 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 CHIAQ9BZP6 476 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 FAM117AQ9C073 453 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 DCSTAMPQ9H295 470 aa19.42■□□□□ 0.7
UPF1-207ENST00000599848 AOC1P19801 751 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 PEX2P28328 305 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 FAM182AQ5T1J6 154 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 NDUFAF5Q5TEU4 345 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 FIGNL1Q6PIW4 674 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 ZNF619Q8N2I2 560 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 CHST14Q8NCH0 376 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 FAM156AQ8NDB6 213 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 MAGIXQ9H6Y5 334 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 CWH43Q9H720 699 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 TAS2R8Q9NYW2 309 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 TCRBV7S3A2A0A539 114 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 FEZF1A0PJY2 475 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 DNAJB5O75953 348 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 COQ5Q5HYK3 327 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 SIAH1Q8IUQ4 282 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 TEX26Q8N6G2 289 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 WDSUB1Q8N9V3 476 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 GOLM1Q8NBJ4 401 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 C16orf78Q8WTQ4 265 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 PLEKHA3Q9HB20 300 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 CXorf49A8MYA2 514 aaPredicted RBP19.41■□□□□ 0.7
UPF1-207ENST00000599848 SCRG1O75711 98 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 SOX14O95416 240 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 TMEM225BP0DP42 221 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 AKR1C2P52895 323 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 GAREM2Q75VX8 874 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 ZNF160Q9HCG1 818 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 IL37Q9NZH6 218 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
UPF1-207ENST00000599848 BTBD17A6NE02 478 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms