RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 TMEM121BQ9BXQ6 578 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 TRIM45Q9H8W5 580 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 THSD1Q9NS62 852 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 ADPRHL2Q9NX46 363 aa14.2□□□□□ -0.14
TRIM28-209ENST00000597423 MRTO4Q9UKD2 239 aaKnown RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 HEMK1Q9Y5R4 338 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-209ENST00000597423 A0A0G2JPF8 293 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 TEX51A0A1B0GUA7 166 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 HNRNPCL2B2RXH8 293 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 HNRNPCL3B7ZW38 293 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 KLF7O75840 302 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 NUDT7P0C024 238 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 HNRNPCL4P0DMR1 293 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 NCK1P16333 377 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 MMP11P24347 488 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 SSTR4P31391 388 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 GABRA3P34903 492 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 SOX11P35716 441 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 STAT5AP42229 794 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 MAN2A2P49641 1150 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 EMDP50402 254 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 CLCN2P51788 898 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 HPCAP84074 193 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 RHDQ02161 417 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 MYBPC3Q14896 1274 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 GPAT3Q53EU6 434 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 CCDC80Q76M96 950 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 SLC29A4Q7RTT9 530 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF615Q8N8J6 731 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 NFKBIDQ8NI38 313 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 DOK4Q8TEW6 326 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 SLC38A5Q8WUX1 472 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 LZICQ8WZA0 190 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 SLC35A4Q96G79 324 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 TRNT1Q96Q11 434 aaKnown RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 LMF2Q9BU23 707 aaKnown RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 BTBD2Q9BX70 525 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 UGT2B28Q9BY64 529 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 ANKRA2Q9H9E1 313 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 FOLH1BQ9HBA9 442 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 TCFL5Q9UL49 500 aa14.19□□□□□ -0.14
TRIM28-209ENST00000597423 SAMD4AQ9UPU9 718 aaKnown RBP14.19□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF292O60281 2723 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 SEC16AO15027 2179 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 LOC102723996A0A087X1L8 192 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DCDC2BA2VCK2 349 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 SAGE2PA6NJ88 616 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 MGRN1O60291 552 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 CNOT3O75175 753 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 ENTPD5O75356 428 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DXOO77932 396 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DDAH2O95865 285 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 C1QCP02747 245 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 GPIP06744 558 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 ICAM2P13598 275 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DRD5P21918 477 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 PSMA4P25789 261 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DLSTP36957 453 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 SLC37A1P57057 533 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 AP2B1P63010 937 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 EEF1A2Q05639 463 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DNASE1L3Q13609 305 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 CCNIQ14094 377 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 EXT1Q16394 746 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 ARHGAP11BQ3KRB8 267 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 PAPD4Q6PIY7 484 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 LANCL3Q6ZV70 420 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 SLC44A2Q8IWA5 706 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 C10orf111Q8N326 155 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 IL22RA1Q8N6P7 574 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 COX18Q8N8Q8 333 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 SLC16A11Q8NCK7 471 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 B3GNT7Q8NFL0 401 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 OR5D16Q8NGK9 328 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 OR5L2Q8NGL0 311 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 C16orf52Q8NHV5 167 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 BBS10Q8TAM1 723 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF721Q8TF20 911 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 RASSF5Q8WWW0 418 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 HOXB13Q92826 284 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 MAL2Q969L2 176 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DCLRE1BQ9H816 532 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 YY1AP1Q9H869 796 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 BCL2L10Q9HD36 194 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 Q9N2J8 555 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 DCAF13Q9NV06 445 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 PPIEQ9UNP9 301 aaKnown RBP14.18□□□□□ -0.14
TRIM28-209ENST00000597423 USP22Q9UPT9 525 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 AK5Q9Y6K8 562 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 FAM186AA6NE01 2351 aa14.18□□□□□ -0.14
TRIM28-209ENST00000597423 COL27A1Q8IZC6 1860 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-209ENST00000597423 TCRBV3S1A0A5B6 114 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 A8MUI8 341 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 CDRT15L2A8MXV6 281 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 NKX2-2O95096 273 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms