RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 VSTM2LQ96N03 204 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 SIGLEC12Q96PQ1 595 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 OR52E6Q96RD3 313 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 NXF5Q9H1B4 397 aaKnown RBP17.85■□□□□ 0.45
PNKP-207ENST00000596014 LRMDAQ9H2I8 198 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 CXorf36Q9H7Y0 433 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 FOLH1BQ9HBA9 442 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 NEUROD4Q9HD90 331 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 SAR1AQ9NR31 198 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 FAM120CQ9NX05 1096 aaKnown RBP17.85■□□□□ 0.45
PNKP-207ENST00000596014 LRFN1Q9P244 771 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 GPR55Q9Y2T6 319 aaPredicted RBP17.85■□□□□ 0.45
PNKP-207ENST00000596014 SNX8Q9Y5X2 465 aa17.85■□□□□ 0.45
PNKP-207ENST00000596014 EMC8O43402 210 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 NEURL1O76050 574 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 OR6B1O95007 311 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 DRD5P21918 477 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 POLR2JP52435 117 aaKnown RBP17.84■□□□□ 0.45
PNKP-207ENST00000596014 DCAF7P61962 342 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 KCNJ2P63252 427 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 SQLEQ14534 574 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 OR1C1Q15619 314 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 OPN5Q6U736 354 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 ZNF227Q86WZ6 799 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 TAGAPQ8N103 731 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 SLC15A4Q8N697 577 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 NUP43Q8NFH3 380 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 PNPLA2Q96AD5 504 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 FAM120BQ96EK7 910 aaKnown RBP17.84■□□□□ 0.45
PNKP-207ENST00000596014 TRIM4Q9C037 500 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 PCDHGB4Q9UN71 923 aa17.84■□□□□ 0.45
PNKP-207ENST00000596014 TRAV17A0A0B4J275 112 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 FAM234BA2RU67 622 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 ERN1O75460 977 aaKnown RBP17.83■□□□□ 0.45
PNKP-207ENST00000596014 PRB1P04280 392 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 CT45A8P0DMV1 189 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 CT45A9P0DMV2 189 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 CCT3P49368 545 aaKnown RBP17.83■□□□□ 0.45
PNKP-207ENST00000596014 PRKAG1P54619 331 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 PRR5P85299 388 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 NNATQ16517 81 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 CT45A2Q5DJT8 189 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 LYPD8Q6UX82 237 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 IL20RBQ6UXL0 311 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 PACS2Q86VP3 889 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 FUNDC1Q8IVP5 155 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 MDS2Q8NDY4 140 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 BTBD9Q96Q07 612 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 ZNF385DQ9H6B1 395 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 RYDENQ9NUL5 291 aaKnown RBP17.83■□□□□ 0.45
PNKP-207ENST00000596014 BTNL2Q9UIR0 455 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 EML6Q6ZMW3 1958 aa17.83■□□□□ 0.45
PNKP-207ENST00000596014 A8MVJ9 347 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 HNRNPCL1O60812 293 aaKnown RBP17.83■□□□□ 0.44
PNKP-207ENST00000596014 CBX6O95503 412 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 CPSF4O95639 269 aaKnown RBP17.83■□□□□ 0.44
PNKP-207ENST00000596014 ZNF155Q12901 538 aaPredicted RBP17.83■□□□□ 0.44
PNKP-207ENST00000596014 ZNF169Q14929 603 aaPredicted RBP17.83■□□□□ 0.44
PNKP-207ENST00000596014 COLEC12Q5KU26 742 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 TMEM64Q6YI46 380 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 SZRD1Q7Z422 152 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 GPALPP1Q8IXQ4 340 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 CYP4Z2PQ8N1L4 340 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 HORMAD2Q8N7B1 307 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 OR4A15Q8NGL6 344 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 CCDC115Q96NT0 180 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 EQTNQ9NQ60 294 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 ZCCHC3Q9NUD5 404 aaKnown RBP17.83■□□□□ 0.44
PNKP-207ENST00000596014 TMEM45AQ9NWC5 275 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 HPF1Q9NWY4 346 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 CCDC167Q9P0B6 97 aa17.83■□□□□ 0.44
PNKP-207ENST00000596014 EXPH5Q8NEV8 1989 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 ACOX3O15254 700 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 T-ENOLP0DO92 83 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 NRG3P56975 720 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 ELF3P78545 371 aaPredicted RBP17.82■□□□□ 0.44
PNKP-207ENST00000596014 PSG6Q00889 435 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 SPDYE7PQ495Y7 208 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 BLOC1S3Q6QNY0 202 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 WDR53Q7Z5U6 358 aaPredicted RBP17.82■□□□□ 0.44
PNKP-207ENST00000596014 Q8NA96 180 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 VPS33AQ96AX1 596 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 HSPBAP1Q96EW2 488 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 GIMAP5Q96F15 307 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 MS4A4EQ96PG1 132 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 NMUR2Q9GZQ4 415 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 LUZP4Q9P127 313 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 ANAPC2Q9UJX6 822 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 NPFFR2Q9Y5X5 522 aa17.82■□□□□ 0.44
PNKP-207ENST00000596014 FRG2CA6NGY1 282 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 EIF4E1BA6NMX2 242 aaKnown RBP17.81■□□□□ 0.44
PNKP-207ENST00000596014 TO15178 435 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 FBXO45P0C2W1 286 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 ABCD3P28288 659 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 LRRC74AQ0VAA2 488 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 RCAN2Q14206 197 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 KRT72Q14CN4 511 aa17.81■□□□□ 0.44
PNKP-207ENST00000596014 ZNF791Q3KP31 576 aaPredicted RBP17.81■□□□□ 0.44
PNKP-207ENST00000596014 TIGD2Q4W5G0 525 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms