RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 BTBD9Q96Q07 612 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 C1orf50Q9BV19 199 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 DEFB127Q9H1M4 99 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 REEP4Q9H6H4 257 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 IL1RL2Q9HB29 575 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 FOLH1BQ9HBA9 442 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CNIH4Q9P003 139 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PRODH2Q9UF12 536 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 SH3BGRL2Q9UJC5 107 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 CFL2Q9Y281 166 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 RAP2CQ9Y3L5 183 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 LRBAP50851 2863 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 PKDREJQ9NTG1 2253 aa10.09□□□□□ -0.79
SHKBP1-206ENST00000595523 KIAA1549Q9HCM3 1950 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 CACNA1DQ01668 2161 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 TACC2O95359 2948 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 A0A087WV62 115 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 TRGV8A0A0C4DH27 118 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ANKRD33BA6NCL7 494 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 FRG2CA6NGY1 282 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 CYSRT1A8MQ03 144 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 UPK1AO00322 258 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PLOD2O00469 737 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ACOX3O15254 700 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PDPK1O15530 556 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ZG16O60844 167 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 UGT2B11O75310 529 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 TRIM3O75382 744 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 BCAS2O75934 225 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PDE9AO76083 593 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 CLDN1O95832 211 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 NAGAP17050 411 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 GRK2P25098 689 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 NTSP30990 170 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PTGDSP41222 190 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 TMED10P49755 219 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC18A1P54219 525 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 NRG3P56975 720 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 DCAF7P61962 342 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PSG6Q00889 435 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PLGLB1Q02325 96 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 RBPJQ06330 500 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PDCD2Q16342 344 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ATP6AP1LQ52LC2 224 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 SLC22A16Q86VW1 577 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 OR2L13Q8N349 312 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 LIX1Q8N485 282 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 FAM109AQ8N4B1 249 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 MGARPQ8TDB4 240 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 DIO2Q92813 273 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 TMBIM1Q969X1 311 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PPCDCQ96CD2 204 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 TUBGCP3Q96CW5 907 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ELP4Q96EB1 424 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 MAGED4Q96JG8 741 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PPP1R36Q96LQ0 422 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 RILPQ96NA2 401 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 NODALQ96S42 347 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 SECISBP2Q96T21 854 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 PAIP2Q9BPZ3 127 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ANGPTL4Q9BY76 406 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 STMN4Q9H169 189 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 ZNF703Q9H7S9 590 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 C19orf53Q9UNZ5 99 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 NOTCH2Q04721 2471 aa10.08□□□□□ -0.8
SHKBP1-206ENST00000595523 DOCK7Q96N67 2140 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 A0A1B0GUH1 482 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 A1L4Q6 167 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 CAPN14A8MX76 684 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ACOT7O00154 380 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 CCL21O00585 134 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ADAM10O14672 748 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 TP53I11O14683 189 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 SCAMP2O15127 329 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 CDC40O60508 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 SNNO75324 88 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ERN1O75460 977 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 SLITRK5O94991 958 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 IGHG3P01860 377 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 IFI6P09912 130 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 H2AFXP16104 143 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 EFNA1P20827 205 aaPredicted RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ENDOUP21128 410 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 CASP3P42574 277 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 ASMTP46597 345 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 CDK9P50750 372 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 RPL14P50914 215 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 KCNJ2P63252 427 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 PLCXD2Q0VAA5 305 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 HSPB3Q12988 150 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 STX3Q13277 289 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 HHATQ5VTY9 493 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
SHKBP1-206ENST00000595523 RGS9BPQ6ZS82 235 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms