RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CT45A2Q5DJT8 189 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 ZNF324BQ6AW86 544 aaPredicted RBP23.74■■□□□ 1.39
TRIM28-204ENST00000594806 ZCCHC12Q6PEW1 402 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 SULF2Q8IWU5 870 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 SLC34A3Q8N130 599 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 OR52B2Q96RD2 323 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 TCF7L2Q9NQB0 619 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 VPS4AQ9UN37 437 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 EML6Q6ZMW3 1958 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 EXPH5Q8NEV8 1989 aa23.74■■□□□ 1.39
TRIM28-204ENST00000594806 RNASET2O00584 256 aaKnown RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 DYNC1I1O14576 645 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 EDF1O60869 148 aaKnown RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 PPM1BO75688 479 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 CDK9P50750 372 aaKnown RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 IRX1P78414 480 aaPredicted RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 ZNF155Q12901 538 aaPredicted RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 TBCELQ5QJ74 424 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 TMEM64Q6YI46 380 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 FBXW8Q8N3Y1 598 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 FAM13CQ8NE31 585 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 NR4A3Q92570 626 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 MOAP1Q96BY2 351 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 MAGED4Q96JG8 741 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 FRMD6Q96NE9 622 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 ZBTB18Q99592 522 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 SLX1AQ9BQ83 275 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 LMF2Q9BU23 707 aaKnown RBP23.73■■□□□ 1.39
TRIM28-204ENST00000594806 TRIM4Q9C037 500 aa23.73■■□□□ 1.39
TRIM28-204ENST00000594806 SVILO95425 2214 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 ANKRD33BA6NCL7 494 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 E9PBE3 544 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 ABCB7O75027 752 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 EDN3P14138 238 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 IDH3AP50213 366 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 LRRC74AQ0VAA2 488 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 PLCXD2Q0VAA5 305 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 VPS26BQ4G0F5 336 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 CYP27C1Q4G0S4 372 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 GK5Q6ZS86 529 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 NUP54Q7Z3B4 507 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 ZFP62Q8NB50 900 aaPredicted RBP23.72■■□□□ 1.39
TRIM28-204ENST00000594806 NUP43Q8NFH3 380 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 HOXB13Q92826 284 aaPredicted RBP23.72■■□□□ 1.39
TRIM28-204ENST00000594806 MS4A4EQ96PG1 132 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 FAM173AQ9BQD7 235 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 SIRT3Q9NTG7 399 aaPredicted RBP23.72■■□□□ 1.39
TRIM28-204ENST00000594806 FAM120CQ9NX05 1096 aaKnown RBP23.72■■□□□ 1.39
TRIM28-204ENST00000594806 ZIM2Q9NZV7 527 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 PCDHGB4Q9UN71 923 aa23.72■■□□□ 1.39
TRIM28-204ENST00000594806 CHCHD2Q9Y6H1 151 aaPredicted RBP23.72■■□□□ 1.39
TRIM28-204ENST00000594806 PRSS51A0A1B0GVH4 220 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 SOX30O94993 753 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 C6orf47O95873 294 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 ABCB1P08183 1280 aaPredicted RBP23.71■■□□□ 1.39
TRIM28-204ENST00000594806 S100A3P33764 101 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 MRPL19P49406 292 aaKnown RBP23.71■■□□□ 1.39
TRIM28-204ENST00000594806 MEOX1P50221 254 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 AQP5P55064 265 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 UFM1P61960 85 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 PSG6Q00889 435 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 IGFBP7Q16270 282 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 OR4F3Q6IEY1 312 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 TMEM81Q6P7N7 255 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 BHLHB9Q6PI77 547 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 SLC44A2Q8IWA5 706 aaPredicted RBP23.71■■□□□ 1.39
TRIM28-204ENST00000594806 CDRT4Q8N9R6 151 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 SFXN5Q8TD22 340 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 OMA1Q96E52 524 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 FAM120BQ96EK7 910 aaKnown RBP23.71■■□□□ 1.39
TRIM28-204ENST00000594806 CCDC134Q9H6E4 229 aa23.71■■□□□ 1.39
TRIM28-204ENST00000594806 SDR39U1Q9NRG7 319 aaPredicted RBP23.71■■□□□ 1.39
TRIM28-204ENST00000594806 MRTO4Q9UKD2 239 aaKnown RBP23.71■■□□□ 1.39
TRIM28-204ENST00000594806 OR6C70A6NIJ9 312 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 CFLARO15519 480 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 CCL3P10147 92 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 EFNA1P20827 205 aaPredicted RBP23.7■■□□□ 1.38
TRIM28-204ENST00000594806 KRT20P35900 424 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 WNT3P56703 355 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 CORO7P57737 925 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 MRPS22P82650 360 aaKnown RBP23.7■■□□□ 1.38
TRIM28-204ENST00000594806 ALDH6A1Q02252 535 aaKnown RBP23.7■■□□□ 1.38
TRIM28-204ENST00000594806 NNATQ16517 81 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 BNC2Q6ZN30 1099 aaPredicted RBP23.7■■□□□ 1.38
TRIM28-204ENST00000594806 CPSF7Q8N684 471 aaKnown RBP23.7■■□□□ 1.38
TRIM28-204ENST00000594806 ST6GALNAC3Q8NDV1 305 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 OR2M7Q8NG81 312 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 OR10G3Q8NGC4 313 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 OR56A1Q8NGH5 318 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 SPPL2AQ8TCT8 520 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 NUDT8Q8WV74 236 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 SLC35A4Q96G79 324 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 Q9N2J8 555 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 OR10H1Q9Y4A9 318 aa23.7■■□□□ 1.38
TRIM28-204ENST00000594806 NINQ8N4C6 2090 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 SLC22A3O75751 556 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 WISP1O95388 367 aa23.69■■□□□ 1.38
TRIM28-204ENST00000594806 CCT3P49368 545 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms