RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RAB15P59190 212 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 RPS26P62854 115 aaKnown RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 RHAGQ02094 409 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 OCA2Q04671 838 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 SLC34A1Q06495 639 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 EIF3IQ13347 325 aaKnown RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 SCARB2Q14108 478 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ELOAQ14241 798 aaKnown RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 LASP1Q14847 261 aaKnown RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 MYBPC3Q14896 1274 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 VWA2Q5GFL6 755 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 CDC73Q6P1J9 531 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 TNFAIP8L2Q6P589 184 aaPredicted RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 OVCH1Q7RTY7 1134 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 SZRD1Q7Z422 152 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 GALNT12Q8IXK2 581 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ADGRG5Q8IZF4 528 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 LGI4Q8N135 537 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 PAPD5Q8NDF8 572 aaKnown RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 MAL2Q969L2 176 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 NCLNQ969V3 563 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 SLCO4A1Q96BD0 722 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 C16orf58Q96GQ5 468 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 LIN37Q96GY3 246 aaPredicted RBP12.56□□□□□ -0.4
VMP1-217ENST00000593168 CTRCQ99895 268 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ZPBPQ9BS86 351 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 UGT2B28Q9BY64 529 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 THSD1Q9NS62 852 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ARMC1Q9NVT9 282 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 SLC39A1Q9NY26 324 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 ANAPC2Q9UJX6 822 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 FER1L5A0AVI2 2057 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
VMP1-217ENST00000593168 MYOCOSA0A1B0GUC4 107 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 TMEM247A6NEH6 219 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 VSTM2BA6NLU5 285 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 K7ENP7 123 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 MEN1O00255 615 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 COQ9O75208 318 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 SOX30O94993 753 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 BAG2O95816 211 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 RECKO95980 971 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 AGR2O95994 175 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 OR12D1P0DN82 309 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 MAOAP21397 527 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 S1PR1P21453 382 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 MAN2A2P49641 1150 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 GNA13Q14344 377 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 MINDY4Q4G0A6 757 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 EXOSC6Q5RKV6 272 aaKnown RBP12.55□□□□□ -0.4
VMP1-217ENST00000593168 REEP3Q6NUK4 255 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 MFSD12Q6NUT3 480 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 INO80CQ6PI98 192 aaPredicted RBP12.55□□□□□ -0.4
VMP1-217ENST00000593168 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 DGAT2L6Q6ZPD8 337 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 CBLL1Q75N03 491 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 RAB11FIP2Q7L804 512 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 VWA5B2Q8N398 1253 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 STT3BQ8TCJ2 826 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 SLC38A5Q8WUX1 472 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 HOXB13Q92826 284 aaPredicted RBP12.55□□□□□ -0.4
VMP1-217ENST00000593168 RAB8BQ92930 207 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 RNF145Q96MT1 663 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 OR7D2Q96RA2 312 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 SLC26A1Q9H2B4 701 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 C14orf105Q9NVL8 296 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 GIN1Q9NXP7 522 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 C6orf203Q9P0P8 240 aaPredicted RBP12.55□□□□□ -0.4
VMP1-217ENST00000593168 STOML1Q9UBI4 398 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 P2RX2Q9UBL9 471 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 RPS6KA6Q9UK32 745 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 SAMD4AQ9UPU9 718 aaKnown RBP12.55□□□□□ -0.4
VMP1-217ENST00000593168 LIPT1Q9Y234 373 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 ANGPT4Q9Y264 503 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 LOXL2Q9Y4K0 774 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 PCDHGA8Q9Y5G5 932 aa12.55□□□□□ -0.4
VMP1-217ENST00000593168 TCRBV16S1A1N1A0A5B0 115 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 OR2W5A6NFC9 320 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 C5orf58C9J3I9 102 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 HNRNPRO43390 633 aaKnown RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 GCM2O75603 506 aaPredicted RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 SERPINA1P01009 418 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 IFNA14P01570 189 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 IFNA16P05015 189 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 KLK3P07288 261 aaPredicted RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 CYC1P08574 325 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 ZGLP1P0C6A0 271 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 GCKP35557 465 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 CLCN2P51788 898 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 FUT7Q11130 342 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 FAM98BQ52LJ0 330 aaKnown RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 TBCELQ5QJ74 424 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 DCAF12Q5T6F0 453 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 PRAMEF8Q5VWM4 474 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 PRAMEF7Q5VXH5 474 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 RNF111Q6ZNA4 994 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 EIF3MQ7L2H7 374 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms