RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 HMGCS1Q01581 520 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 EXOSC7Q15024 291 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 ANKRD34AQ69YU3 496 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 RAPH1Q70E73 1250 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 UBQLNLQ8IYU4 475 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 ADCY4Q8NFM4 1077 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 TMCO6Q96DC7 493 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 ZNF845Q96IR2 970 aaPredicted RBP17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 RBBP8Q99708 897 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 CPNE1Q99829 537 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 NMRAL1Q9HBL8 299 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 FBXL2Q9UKC9 423 aa17.74■□□□□ 0.43
PRKCSH-216ENST00000592445 PAX1P15863 534 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 LOXP28300 417 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 KIR2DL2P43627 348 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 NEK2P51955 445 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 NR1H2P55055 460 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 DR1Q01658 176 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 TNK1Q13470 666 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 ZKSCAN8Q15776 578 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 OR5M10Q6IEU7 315 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 FAM111BQ6SJ93 734 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 KLHL7Q8IXQ5 586 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 ATOH8Q96SQ7 321 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 TRIM31Q9BZY9 425 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 KLHL4Q9C0H6 718 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 ZNF701Q9NV72 531 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 HEY2Q9UBP5 337 aa17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 SONP18583 2426 aaKnown RBP17.73■□□□□ 0.43
PRKCSH-216ENST00000592445 GOLGA6L10A6NI86 522 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 SEC31AO94979 1220 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 IFNA2P01563 188 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 KLK1P06870 262 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 KRTAP1-1Q07627 177 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 BCL2A1Q16548 175 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 HEPHL1Q6MZM0 1159 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 PODNL1Q6PEZ8 512 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 TBC1D1Q86TI0 1168 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 PHC2Q8IXK0 858 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 MAPK1IP1LQ8NDC0 245 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 COL21A1Q96P44 957 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 SERPINI1Q99574 410 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 PSD3Q9NYI0 1048 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 SNX12Q9UMY4 172 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 PLLPQ9Y342 182 aa17.72■□□□□ 0.43
PRKCSH-216ENST00000592445 RAI1Q7Z5J4 1906 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 LRRC14BA6NHZ5 514 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 E7ESA3 106 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 FOXE1O00358 373 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 EMC8O43402 210 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 UGDHO60701 494 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 REM1O75628 298 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 TP53P04637 393 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 TBXA2RP21731 343 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 DRD5P21918 477 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 DPP4P27487 766 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 SSTR1P30872 391 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 GP5P40197 560 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 PIK3CGP48736 1102 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 MAP4K2Q12851 820 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 DLG1Q12959 904 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 FGFBP1Q14512 234 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 PRICKLE4Q2TBC4 344 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 ZNF704Q6ZNC4 412 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 C22orf34Q6ZV56 151 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 LRRC8AQ8IWT6 810 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 ZNF610Q8N9Z0 462 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 OR52R1Q8NGF1 315 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 IGFBPL1Q8WX77 278 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 FIG4Q92562 907 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 CAVIN3Q969G5 261 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 TMBIM1Q969X1 311 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 PRODH2Q9UF12 536 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 PROCRQ9UNN8 238 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 RNF11Q9Y3C5 154 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 MRPS18CQ9Y3D5 142 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 NBEAL1Q6ZS30 2694 aa17.71■□□□□ 0.43
PRKCSH-216ENST00000592445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 OR6C70A6NIJ9 312 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 SYCE1LA8MT33 242 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 EFCAB8A8MWE9 144 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 RNF223E7ERA6 249 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 ZIC3O60481 467 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 ERAL1O75616 437 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 SEMA3DO95025 777 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 LTA4HP09960 611 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 CD8BP10966 210 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 PEPDP12955 493 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 GFAPP14136 432 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 FEN1P39748 380 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 ARL1P40616 181 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 PPICP45877 212 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 EEFSECP57772 596 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 MGAT2Q10469 447 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 VEZF1Q14119 521 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 CAPRIN1Q14444 709 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 SLMAPQ14BN4 828 aa17.7■□□□□ 0.42
PRKCSH-216ENST00000592445 EXOC3L2Q2M3D2 409 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms