RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 EMX2Q04743 252 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SLC10A1Q14973 349 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 RPS6KA2Q15349 733 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 TOMM20Q15388 145 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 NTRK2Q16620 822 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PGS1Q32NB8 556 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 XKR7Q5GH72 579 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 CPTPQ5TA50 214 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 MTFR2Q6P444 385 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 LYPD8Q6UX82 237 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF551Q7Z340 670 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 NUP54Q7Z3B4 507 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PACS2Q86VP3 889 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SPPL2CQ8IUH8 684 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SIAH3Q8IW03 269 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SLC44A2Q8IWA5 706 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SLC34A3Q8N130 599 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 EID3Q8N140 333 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 FBXW8Q8N3Y1 598 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SIMC1Q8NDZ2 872 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 OR7G2Q8NG99 324 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 CEP70Q8NHQ1 597 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 SPPL2AQ8TCT8 520 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 PAQR8Q8TEZ7 354 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 TMBIM1Q969X1 311 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 CIDECQ96AQ7 238 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 ARL8AQ96BM9 186 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 TMCO6Q96DC7 493 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 CHMP6Q96FZ7 201 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 FCRL1Q96LA6 429 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 TTTY12Q9BZ98 90 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 NUF2Q9BZD4 464 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 ANKRA2Q9H9E1 313 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 FOLH1BQ9HBA9 442 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 TUBA8Q9NY65 449 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 NOP53Q9NZM5 478 aaKnown RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 MRTO4Q9UKD2 239 aaKnown RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 C19orf53Q9UNZ5 99 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-227ENST00000591849 MAPRE3Q9UPY8 281 aa9.27□□□□□ -0.93
BRCA1-227ENST00000591849 A0A0G2JMM0 328 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 A0A1B0GTH9 108 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 A0A1W2PPB8 328 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 A0A1W2PRB8 838 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 A0A1W2PRS3 328 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 PINLYPA6NC86 204 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 TRPC5OSA6NMA1 111 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 KIR3DP1A8MWS1 328 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 PLOD2O00469 737 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SCAMP2O15127 329 aaKnown RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 TBX19O60806 448 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 NME6O75414 186 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 TRAPPC6AO75865 159 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 WISP2O76076 250 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SNX4O95219 450 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 TPOP07202 933 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ABCB1P08183 1280 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 G6PDP11413 515 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 LBPP18428 481 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 EFNA1P20827 205 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 PRPS1L1P21108 318 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 RFX3P48380 749 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 PSPHP78330 225 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 DUSP8Q13202 625 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 EFR3AQ14156 821 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 CEBPEQ15744 281 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 DECR1Q16698 335 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 PRSS53Q2L4Q9 553 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SMU1Q2TAY7 513 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 LSM12Q3MHD2 195 aaKnown RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SPDYE7PQ495Y7 208 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 CES4AQ5XG92 561 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 NXNQ6DKJ4 435 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ARHGAP11AQ6P4F7 1023 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 LARP4Q71RC2 724 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 FAM109AQ8N4B1 249 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 TMEM251Q8N6I4 163 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 NATD1Q8N6N6 113 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 OR52N2Q8NGI0 321 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 RAB3IL1Q8TBN0 382 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ELP4Q96EB1 424 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ATP6V1G3Q96LB4 118 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF597Q96LX8 424 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 RILPQ96NA2 401 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 COL21A1Q96P44 957 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SECISBP2Q96T21 854 aaKnown RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SORT1Q99523 831 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 DPY30Q9C005 99 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 C20orf27Q9GZN8 174 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 AKTIPQ9H8T0 292 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ZFP64Q9NPA5 681 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 EQTNQ9NQ60 294 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ACSS1Q9NUB1 689 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 KLRF1Q9NZS2 232 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 MARCOQ9UEW3 520 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ATP6V1HQ9UI12 483 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ERRFI1Q9UJM3 462 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 CNOT11Q9UKZ1 510 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms