RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 FAM47EQ6ZV65 393 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 LARP4Q71RC2 724 aaKnown RBP eCLIP10.59□□□□□ -0.71
VMP1-211ENST00000591315 SAMD14Q8IZD0 417 aaPredicted RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 TAGAPQ8N103 731 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 SLC15A4Q8N697 577 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 FBXO30Q8TB52 745 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 PAQR8Q8TEZ7 354 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 TMBIM1Q969X1 311 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 OMA1Q96E52 524 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 OTUB1Q96FW1 271 aaPredicted RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 SGCZQ96LD1 299 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 NODALQ96S42 347 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 MEAF6Q9HAF1 191 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 SACM1LQ9NTJ5 587 aa10.59□□□□□ -0.71
VMP1-211ENST00000591315 ERRFI1Q9UJM3 462 aaPredicted RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 C19orf53Q9UNZ5 99 aaPredicted RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 EIF3LQ9Y262 564 aaKnown RBP10.59□□□□□ -0.71
VMP1-211ENST00000591315 A0A087WV62 115 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 GXYLT2A0PJZ3 443 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 LRRC3CA6NJW4 275 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 C17orf51A8MQB3 221 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 HMGB1P1B2RPK0 211 aaPredicted RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 PLOD2O00469 737 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 ANKRD28O15084 1053 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 HDAC3O15379 428 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 ASNA1O43681 348 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 UGT2B11O75310 529 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 ERN1O75460 977 aaKnown RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 PPM1BO75688 479 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 GLSO94925 669 aaPredicted RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 PSMG1O95456 288 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 C6orf47O95873 294 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 P04436 131 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 RFPL3SP0C7P2 107 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 PRPS2P11908 318 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 DRD5P21918 477 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 MAPK1P28482 360 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 EPHA3P29320 983 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 GPC1P35052 558 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 HPCAL1P37235 193 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 FRKP42685 505 aaPredicted RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 PRKAG1P54619 331 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 MANFP55145 182 aaKnown RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 PPIAP62937 165 aaKnown RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 PPP2R2AP63151 447 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 PSG6Q00889 435 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 PGS1Q32NB8 556 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 CMPK2Q5EBM0 449 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 CPTPQ5TA50 214 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 C1QL3Q5VWW1 255 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 TMEM198Q66K66 360 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 ATG16L1Q676U5 607 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 SLC44A2Q8IWA5 706 aaPredicted RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 OR2L13Q8N349 312 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 FBXW8Q8N3Y1 598 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 TMEM251Q8N6I4 163 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 GOLM1Q8NBJ4 401 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 FAM98AQ8NCA5 519 aaKnown RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 SPPL2AQ8TCT8 520 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 DIO2Q92813 273 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 HGDQ93099 445 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 COQ8BQ96D53 544 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 C16orf58Q96GQ5 468 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 ZNF764Q96H86 408 aaPredicted RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 MARK4Q96L34 752 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 TEX37Q96LM6 180 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 GPR137Q96N19 417 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 BTBD9Q96Q07 612 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 OR52B2Q96RD2 323 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 YIPF4Q9BSR8 244 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 TTTY12Q9BZ98 90 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 EQTNQ9NQ60 294 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 SIRT3Q9NTG7 399 aaPredicted RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 DDX18Q9NVP1 670 aaKnown RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 FLRT3Q9NZU0 649 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 PRODH2Q9UF12 536 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 SH3BGRL2Q9UJC5 107 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 LIPGQ9Y5X9 500 aa10.58□□□□□ -0.72
VMP1-211ENST00000591315 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.58□□□□□ -0.72
VMP1-211ENST00000591315 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 UQCRHLA0A096LP55 91 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 FRG2CA6NGY1 282 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 TFECO14948 347 aaPredicted RBP10.57□□□□□ -0.72
VMP1-211ENST00000591315 TO15178 435 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 CDC40O60508 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
VMP1-211ENST00000591315 REM1O75628 298 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 C1QCP02747 245 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 LBPP18428 481 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 IL12AP29459 219 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 PTGDSP41222 190 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 MAGEA5P43359 124 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 WNT3P56703 355 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 CLDN8P56748 225 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 NRG3P56975 720 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 UFM1P61960 85 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 PHC1P78364 1004 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 PLGLB1Q02325 96 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 PLCXD2Q0VAA5 305 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 GAB1Q13480 694 aa10.57□□□□□ -0.72
VMP1-211ENST00000591315 UBAP2LQ14157 1087 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms