RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 LEF1Q9UJU2 399 aaPredicted RBP15.84■□□□□ 0.13
RPRD1A-209ENST00000590898 PRPF19Q9UMS4 504 aaKnown RBP15.84■□□□□ 0.13
RPRD1A-209ENST00000590898 POMPQ9Y244 141 aa15.84■□□□□ 0.13
RPRD1A-209ENST00000590898 SNX8Q9Y5X2 465 aa15.84■□□□□ 0.13
RPRD1A-209ENST00000590898 CPAMD8Q8IZJ3 1885 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 ERN1O75460 977 aaKnown RBP15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 KRT36O76013 467 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 SOX30O94993 753 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 ABCB1P08183 1280 aaPredicted RBP15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 TCN1P20061 433 aaPredicted RBP15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 CCL11P51671 97 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 SNCBQ16143 134 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 TBR1Q16650 682 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 SLC5A8Q8N695 610 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 SIMC1Q8NDZ2 872 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 NUP43Q8NFH3 380 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 OR56A1Q8NGH5 318 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 TP53INP1Q96A56 240 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 ADA2Q9NZK5 511 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 TEKT2Q9UIF3 430 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 VPS4AQ9UN37 437 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 HEMK1Q9Y5R4 338 aaPredicted RBP15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 ATMQ13315 3056 aa15.83■□□□□ 0.12
RPRD1A-209ENST00000590898 TTC36A6NLP5 189 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 DNAJB5O75953 348 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 DCAF7P61962 342 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 DUSP8Q13202 625 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 EBPQ15125 230 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 LRIF1Q5T3J3 769 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ZNF621Q6ZSS3 439 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 RPS19BP1Q86WX3 136 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 C9orf40Q8IXQ3 194 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 AMER2Q8N7J2 671 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 BRIX1Q8TDN6 353 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ZNF354BQ96LW1 612 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 INPP5KQ9BT40 448 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ANKRA2Q9H9E1 313 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ZCCHC3Q9NUD5 404 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 NDE1Q9NXR1 346 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 MYOTQ9UBF9 498 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 PCDHGA9Q9Y5G4 932 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 A0A096LPI6 279 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 C2orf92A0A1B0GVN3 265 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 TMEM200CA6NKL6 621 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 NPPAP01160 153 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 PTPN6P29350 595 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 PPICP45877 212 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 SLC7A2P52569 658 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ACTR3P61158 418 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ST3GAL2Q16842 350 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 TRMT5Q32P41 509 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 CRB2Q5IJ48 1285 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 C6orf10Q5SRN2 563 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 AGAP7PQ5VUJ5 663 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 HACD2Q6Y1H2 254 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 PCYOX1LQ8NBM8 494 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 HOXB13Q92826 284 aaPredicted RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 ADIPOR1Q96A54 375 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 GIMAP5Q96F15 307 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 MAGED4Q96JG8 741 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 VSTM2LQ96N03 204 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 AGAP4Q96P64 663 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 MS4A4EQ96PG1 132 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 GPATCH1Q9BRR8 931 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 WWTR1Q9GZV5 400 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 L3MBTL1Q9Y468 752 aa15.82■□□□□ 0.12
RPRD1A-209ENST00000590898 CACNA1BQ00975 2339 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 EPG5Q9HCE0 2579 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 PRKNO60260 465 aaPredicted RBP15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 KCNH1O95259 989 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 ANP32DO95626 131 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 PSPHP78330 225 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 MS4A2Q01362 244 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 NFYCQ13952 458 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 CCNIQ14094 377 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 MEP1AQ16819 746 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 SPDYE7PQ495Y7 208 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 HLA-DQA1Q5Y7H0 255 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 HIPK4Q8NE63 616 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 ROPN1LQ96C74 230 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 LRRC58Q96CX6 371 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 LMF1Q96S06 567 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 PAIP1Q9H074 479 aaKnown RBP15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 ZNF552Q9H707 407 aaPredicted RBP15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 SPAG4Q9NPE6 437 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 GPR83Q9NYM4 423 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 GMEB1Q9Y692 573 aa15.81■□□□□ 0.12
RPRD1A-209ENST00000590898 PRORSD1PA6NEY8 169 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 A6NL46 340 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 DRD5P21918 477 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 SOX11P35716 441 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 MAP3K8P41279 467 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 CDKN2CP42773 168 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 MAGEA8P43361 318 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 PRIM2P49643 509 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 PRKAG1P54619 331 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 MLF1P58340 268 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 C6orf120Q7Z4R8 191 aa15.8■□□□□ 0.12
RPRD1A-209ENST00000590898 SLC15A4Q8N697 577 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms