RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 HNRNPA1P09651 372 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 PYCR1P32322 319 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 RNF31Q96EP0 1072 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 PRRC1Q96M27 445 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 RHNO1Q9BSD3 238 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 CDADC1Q9BWV3 514 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 LRRN3Q9H3W5 708 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 C14orf105Q9NVL8 296 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 KLK4Q9Y5K2 254 aa16.2■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC6A12P48065 614 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RPS21P63220 83 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 HOXC5Q00444 222 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 MLLT11Q13015 90 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 CAMK1Q14012 370 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 ALG11Q2TAA5 492 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC44A3Q8N4M1 653 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 FUZQ9BT04 418 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 PINK1Q9BXM7 581 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RNF167Q9H6Y7 350 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 CSNK1G3Q9Y6M4 447 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 MEIOCA2RUB1 952 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 OR2B3O76000 313 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 DNASE1L1P49184 302 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RHAGQ02094 409 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RPL6Q02878 288 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF566Q969W8 418 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 DGAT2Q96PD7 388 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 DUSP21Q9H596 190 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 CXorf36Q9H7Y0 433 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 LYRM1O43325 122 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 KLHL18O94889 574 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 OR12D2P58182 307 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 C8orf82Q6P1X6 216 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 NRARPQ7Z6K4 114 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 S100A13Q99584 98 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 ACTRT3Q9BYD9 372 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 FZD3Q9NPG1 666 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 H3BNC9 293 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 FZD6O60353 706 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 SEMA3DO95025 777 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RENP00797 406 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 TIAL1Q01085 375 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RAB40BQ12829 278 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 RPTNQ6XPR3 784 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 C7orf61Q8IZ16 206 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 ACTL8Q9H568 366 aa16.19■□□□□ 0.18
SMARCA4-215ENST00000590574 BLOC1S5-TXNDC5H3BN57 136 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 WWP2O00308 870 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 NAA10P41227 235 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 GNG2P59768 71 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SIM1P81133 766 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 PIP5KL1Q5T9C9 394 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 XAF1Q6GPH4 301 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 AMIGO1Q86WK6 493 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 OR2M4Q96R27 311 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TM9SF2Q99805 663 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 RBCK1Q9BYM8 510 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC7A7Q9UM01 511 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 HEPACAM2A8MVW5 462 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF670-ZNF695F2Z2N8 137 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SNRPD2P62316 118 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 FIGNL1Q6PIW4 674 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 CPOQ8IVL8 374 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 LAX1Q8IWV1 398 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 CELF2-AS1Q8N7Q2 184 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TREX2Q9BQ50 279 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 THSD1Q9NS62 852 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TMEM184CQ9NVA4 438 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SPATA6Q9NWH7 488 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 GFYI3L273 518 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 PRKYO43930 277 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TRAM1Q15629 374 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 OR2G6Q5TZ20 316 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 BCDIN3DQ7Z5W3 292 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 UBE2Q1Q7Z7E8 422 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 Q9N2J8 555 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 POU2F3Q9UKI9 436 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 GPR34Q9UPC5 381 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 DNMT3AQ9Y6K1 912 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 ARID2Q68CP9 1835 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 A0A1W2PQU0 124 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 A0A1W2PRQ8 180 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 B4GALT2O60909 372 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 EPHA2P29317 976 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 IL12BP29460 328 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 MRPL19P49406 292 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 ODF4Q2M2E3 257 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SPRYD4Q8WW59 207 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 ACOT12Q8WYK0 555 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SCG5P05408 212 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 HTR2BP41595 481 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TAP2Q03519 686 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 SOWAHCQ53LP3 525 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TIGD4Q8IY51 512 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 EGLN3Q9H6Z9 239 aa16.18■□□□□ 0.18
SMARCA4-215ENST00000590574 TRBV5-4A0A0C4DH59 114 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC22A31A6NKX4 558 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms