RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 FDCSPQ8NFU4 85 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 ROPN1LQ96C74 230 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 RCN3Q96D15 328 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 HSPBAP1Q96EW2 488 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 CRELD1Q96HD1 420 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 LCORQ96JN0 433 aaPredicted RBP11.16□□□□□ -0.62
APOC1-206ENST00000590334 ZNF354BQ96LW1 612 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 LMF1Q96S06 567 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 ACTRT3Q9BYD9 372 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 ZNF552Q9H707 407 aaPredicted RBP11.16□□□□□ -0.62
APOC1-206ENST00000590334 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 ARL8BQ9NVJ2 186 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 GPR83Q9NYM4 423 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 TEKT2Q9UIF3 430 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 YARS2Q9Y2Z4 477 aaKnown RBP11.16□□□□□ -0.62
APOC1-206ENST00000590334 PCDHGA9Q9Y5G4 932 aaKnown RBP11.16□□□□□ -0.62
APOC1-206ENST00000590334 PTPRQQ9UMZ3 2332 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 BOD1L1Q8NFC6 3051 aa11.16□□□□□ -0.62
APOC1-206ENST00000590334 A6NL46 340 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 A8MUI8 341 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 FXYD1O00168 92 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 CLIC1O00299 241 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 ACOX3O15254 700 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 ASNA1O43681 348 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 NME6O75414 186 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 KRT75O95678 551 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 C1QCP02747 245 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 ACP2P11117 423 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 PPIBP23284 216 aaKnown RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 CHI3L1P36222 383 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 MVDP53602 400 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 ZNF155Q12901 538 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 NFYCQ13952 458 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 ZNHIT3Q15649 155 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 ST3GAL2Q16842 350 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 RUNDC3AQ59EK9 446 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 AGAP7PQ5VUJ5 663 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 HLA-DQA1Q5Y7H0 255 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 B3GNTL1Q67FW5 361 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 C8orf82Q6P1X6 216 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 ISLR2Q6UXK2 745 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 NPSR1Q6W5P4 371 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 HACD2Q6Y1H2 254 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 SZRD1Q7Z422 152 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 SLC16A11Q8NCK7 471 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 THAP3Q8WTV1 239 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 LRRC58Q96CX6 371 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 C16orf58Q96GQ5 468 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 SLC35G5Q96KT7 338 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 ANKRD27Q96NW4 1050 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 AGAP4Q96P64 663 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 GAL3ST4Q96RP7 486 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 RASL10BQ96S79 203 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 STACQ99469 402 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 CGREF1Q99674 301 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 SMAD5Q99717 465 aaKnown RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 CPPED1Q9BRF8 314 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 RNF32Q9H0A6 362 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 NXF5Q9H1B4 397 aaKnown RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 CDCP1Q9H5V8 836 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 LIN28AQ9H9Z2 209 aaKnown RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 TPT1P8Q9HAU6 139 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 EQTNQ9NQ60 294 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 DUSP22Q9NRW4 184 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 GID8Q9NWU2 228 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 TAGLN3Q9UI15 199 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 FAF1Q9UNN5 650 aaPredicted RBP11.15□□□□□ -0.62
APOC1-206ENST00000590334 PCDHGB7Q9Y5F8 929 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 ACACBO00763 2458 aa11.15□□□□□ -0.62
APOC1-206ENST00000590334 MAP1BP46821 2468 aaKnown RBP11.14□□□□□ -0.63
APOC1-206ENST00000590334 DUXAA6NLW8 204 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 CCT8L1PA6NM43 557 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 WWP2O00308 870 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 MAN1A2O60476 641 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 ZNF354AO60765 605 aaPredicted RBP11.14□□□□□ -0.63
APOC1-206ENST00000590334 ITGA10O75578 1167 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 OR2J2O76002 312 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 UNC5CO95185 931 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 ALOX5P09917 674 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 GPX2P18283 190 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 MATN1P21941 496 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 TRHRP34981 398 aaPredicted RBP11.14□□□□□ -0.63
APOC1-206ENST00000590334 NR0B1P51843 470 aaKnown RBP11.14□□□□□ -0.63
APOC1-206ENST00000590334 POLE2P56282 527 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 CORO7P57737 925 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 RHDQ02161 417 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 MFAP5Q13361 173 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 DUSP5Q16690 384 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 COL28A1Q2UY09 1125 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 LINC00303Q3SY05 128 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 CYP27C1Q4G0S4 372 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 ABHD17BQ5VST6 288 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 AP1ARQ63HQ0 302 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 FCRLBQ6BAA4 426 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 C6orf89Q6UWU4 347 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
APOC1-206ENST00000590334 C16orf47Q6ZP98 133 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms