RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PPICP45877 212 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 KHKP50053 298 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 ANXA11P50995 505 aaKnown RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 MVDP53602 400 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CORO7P57737 925 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 MTPNP58546 118 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CXADRP78310 365 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 TXNL4AP83876 142 aaKnown RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 PSG6Q00889 435 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 BNIP1Q12981 228 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 RGNQ15493 299 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CT45A2Q5DJT8 189 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 EXOSC6Q5RKV6 272 aaKnown RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 NANOGP8Q6NSW7 305 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 TCTN3Q6NUS6 607 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 H3F3CQ6NXT2 135 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 TNFAIP8L2Q6P589 184 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 SIRT6Q8N6T7 355 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 ZNF441Q8N8Z8 693 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 SLC16A11Q8NCK7 471 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 C17orf47Q8NEP4 570 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 OR8J3Q8NGG0 315 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 FBXO27Q8NI29 283 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 ADAMTS15Q8TE58 950 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 PSMF1Q92530 271 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 TP53INP1Q96A56 240 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 OTUB1Q96FW1 271 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 LCORQ96JN0 433 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 BTBD9Q96Q07 612 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 OR7D2Q96RA2 312 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 STACQ99469 402 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 GPATCH1Q9BRR8 931 aaKnown RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 THUMPD3Q9BV44 507 aaKnown RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 TRIM8Q9BZR9 551 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 OR51I1Q9H343 314 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 SERHL2Q9H4I8 314 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 IKZF5Q9H5V7 419 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 NANOGQ9H9S0 305 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 LIN28AQ9H9Z2 209 aaKnown RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 GIN1Q9NXP7 522 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 NDE1Q9NXR1 346 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 MYOTQ9UBF9 498 aa14.06□□□□□ -0.16
ATG4D-211ENST00000589753 GPR55Q9Y2T6 319 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-211ENST00000589753 CEP295Q9C0D2 2601 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 C15orf38-AP3S2A0A0A6YYH1 394 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 FRG2CA6NGY1 282 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 A6NL46 340 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 DUXAA6NLW8 204 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 WWP2O00308 870 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 SOX30O94993 753 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 NKX2-2O95096 273 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 GPX2P18283 190 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 SLC6A2P23975 617 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 GABRA3P34903 492 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 MAP3K8P41279 467 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 MAN2A2P49641 1150 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 CCL11P51671 97 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 NR0B1P51843 470 aaKnown RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 PSME3P61289 254 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 SLC25A3Q00325 362 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 FADDQ13158 208 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 SELPLGQ14242 412 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 NNATQ16517 81 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 DUSP5Q16690 384 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 COX20Q5RI15 118 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 FCRLBQ6BAA4 426 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 C8orf82Q6P1X6 216 aaPredicted RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 C16orf89Q6UX73 402 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 NPSR1Q6W5P4 371 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 GPR155Q7Z3F1 870 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 ARPINQ7Z6K5 226 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 RPS19BP1Q86WX3 136 aaKnown RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 SLC44A2Q8IWA5 706 aaPredicted RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 LGI4Q8N135 537 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 ARMC10Q8N2F6 343 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 HORMAD2Q8N7B1 307 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 OR5D16Q8NGK9 328 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 GPR151Q8TDV0 419 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 NXF5Q9H1B4 397 aaKnown RBP14.05□□□□□ -0.16
ATG4D-211ENST00000589753 PIGUQ9H490 435 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 CDCP1Q9H5V8 836 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 Q9N2J8 555 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 DUSP22Q9NRW4 184 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 TEKT2Q9UIF3 430 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 ZMIZ1Q9ULJ6 1067 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 OR10H1Q9Y4A9 318 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
ATG4D-211ENST00000589753 NUP214P35658 2090 aaPredicted RBP14.04□□□□□ -0.16
ATG4D-211ENST00000589753 HMGN4O00479 90 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 ACOX3O15254 700 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 ASNA1O43681 348 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 ATP5HO75947 161 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 DNAJB5O75953 348 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 OR2J2O76002 312 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 AGR2O95994 175 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 OR12D1P0DN82 309 aa14.04□□□□□ -0.16
ATG4D-211ENST00000589753 ETFAP13804 333 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms