RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TM9SF2Q99805 663 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 HAUS8Q9BT25 410 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 AICDAQ9GZX7 198 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 OPN3Q9H1Y3 402 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 PFDN4Q9NQP4 134 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 CCDC177Q9NQR7 707 aaPredicted RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 INTS9Q9NV88 658 aaKnown RBP5.51□□□□□ -1.53
VPS25-204ENST00000589577 OPTCQ9UBM4 332 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 PLLPQ9Y342 182 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 DYRK1BQ9Y463 629 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
VPS25-204ENST00000589577 HMX2A2RU54 273 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 TMEM89A2RUT3 159 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 C16orf97H3BN30 126 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 H3BQF6 201 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 STX16-NPEPL1H3BU86 382 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 GFYI3L273 518 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CDC7O00311 574 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 STX16O14662 325 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 BIRC5O15392 142 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 NDUFS4O43181 175 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 SSX4O60224 188 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CCNT2O60583 730 aaKnown RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 PLIN3O60664 434 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 TRIM13O60858 407 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 STK16O75716 305 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 SNUPNO95149 360 aaKnown RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 TGM6O95932 706 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CHEK2O96017 543 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CGAP01215 116 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CD8AP01732 235 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 RNH1P13489 461 aaKnown RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 CYP4B1P13584 511 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 POU2F1P14859 743 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CPN1P15169 458 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 GRK2P25098 689 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 DPP4P27487 766 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 IMPA1P29218 277 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 RBMXP38159 391 aaKnown RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 SLC18A1P54219 525 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 PHEXP78562 749 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 RCAN2Q14206 197 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 HIST2H2ACQ16777 129 aaPredicted RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 PFKFB4Q16877 469 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 PGGHGQ32M88 737 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 PIGGQ5H8A4 983 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 TECRLQ5HYJ1 363 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 BICRALQ6AI39 1079 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 HIST2H2AA3Q6FI13 130 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ADAM5Q6NVV9 412 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ZYG11AQ6WRX3 759 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 LRRC70Q7Z2Q7 622 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CA13Q8N1Q1 262 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 SPATA6LQ8N4H0 392 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 LRRC17Q8N6Y2 441 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CCNYL1Q8N7R7 359 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 PTGR2Q8N8N7 351 aaPredicted RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 SNX31Q8N9S9 440 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 MFSD9Q8NBP5 474 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 OR10G3Q8NGC4 313 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 OR8K3Q8NH51 312 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 LRRC8CQ8TDW0 803 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 UTP15Q8TED0 518 aaKnown RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 MZB1Q8WU39 189 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ANKRD49Q8WVL7 239 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CCT6BQ92526 530 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 WNT2BQ93097 391 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ABTB1Q969K4 478 aaPredicted RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 GTPBP3Q969Y2 492 aaKnown RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 ARL8AQ96BM9 186 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ZBTB9Q96C00 473 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 FBXL8Q96CD0 374 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 CTHRC1Q96CG8 243 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 SPACA9Q96E40 222 aaPredicted RBP5.5□□□□□ -1.53
VPS25-204ENST00000589577 PHF21BQ96EK2 531 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ZNF597Q96LX8 424 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 RHNO1Q9BSD3 238 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 TRMOQ9BU70 441 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 RHBGQ9H310 441 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ADAP2Q9NPF8 381 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 ZNF446Q9NWS9 450 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 GALPQ9UBC7 116 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 HEY2Q9UBP5 337 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 METRNQ9UJH8 293 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 PDE10AQ9Y233 779 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 MED16Q9Y2X0 877 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 MMACHCQ9Y4U1 282 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 KCNE2Q9Y6J6 123 aa5.5□□□□□ -1.53
VPS25-204ENST00000589577 MYOCOSA0A1B0GUC4 107 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 K7EPI3 171 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 UBXN8O00124 270 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 CLGNO14967 610 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 TYROBPO43914 113 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 TRAPPC6AO75865 159 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 SUPT7LO94864 414 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 WDR47O94967 919 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 HSPA4LO95757 839 aa5.49□□□□□ -1.53
VPS25-204ENST00000589577 OTCP00480 354 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms