RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ARMCX1Q9P291 453 aa17.53■□□□□ 0.4
CLPTM1-209ENST00000588855 GPR55Q9Y2T6 319 aaPredicted RBP17.53■□□□□ 0.4
CLPTM1-209ENST00000588855 OR5H15A6NDH6 313 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 FRG2CA6NGY1 282 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 RFXANKO14593 260 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 OR6B1O95007 311 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 HMGN2P05204 90 aaKnown RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 CT45A8P0DMV1 189 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 CT45A9P0DMV2 189 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 SFTPCP11686 197 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 DRD5P21918 477 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 TRHRP34981 398 aaPredicted RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 CD96P40200 585 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 DCAF7P61962 342 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 PSG6Q00889 435 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 LASP1Q14847 261 aaKnown RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 TLR1Q15399 786 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 CT45A2Q5DJT8 189 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 C6orf10Q5SRN2 563 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 MFSD12Q6NUT3 480 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 MTDHQ86UE4 582 aaKnown RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 PRR22Q8IZ63 422 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 ZADH2Q8N4Q0 377 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 TMEM156Q8N614 296 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 RBMXL3Q8N7X1 1067 aaKnown RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 ASB15Q8WXK1 588 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 GTF2H4Q92759 462 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 HAS2Q92819 552 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 OTUB1Q96FW1 271 aaPredicted RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 C16orf58Q96GQ5 468 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 UTP23Q9BRU9 249 aaKnown RBP17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 YIPF4Q9BSR8 244 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 GPATCH2Q9NW75 528 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 VPS4AQ9UN37 437 aa17.52■□□□□ 0.4
CLPTM1-209ENST00000588855 A0A1W2PP18 115 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 DPM1O60762 260 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 CCDC22O60826 627 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 C1QCP02747 245 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 SNRPB2P08579 225 aaKnown RBP17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 ACP2P11117 423 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 UQCRC2P22695 453 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 CASRP41180 1078 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 HLCSP50747 726 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 OC90Q02509 493 aaPredicted RBP17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 GTDC1Q4AE62 458 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 PAGE3Q5JUK9 113 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 LYPD8Q6UX82 237 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 ZNF621Q6ZSS3 439 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC44A2Q8IWA5 706 aaPredicted RBP17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 TAGAPQ8N103 731 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 CDRT4Q8N9R6 151 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 CATSPER1Q8NEC5 780 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 HOXB13Q92826 284 aaPredicted RBP17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 BBC3Q96PG8 261 aaPredicted RBP17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 SIGLEC12Q96PQ1 595 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC35A5Q9BS91 424 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 LMF2Q9BU23 707 aaKnown RBP17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 MFRPQ9BY79 579 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 ARL2BPQ9Y2Y0 163 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 CAPN7Q9Y6W3 813 aa17.52■□□□□ 0.39
CLPTM1-209ENST00000588855 A8MVJ9 347 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 PTPN6P29350 595 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 MAP3K8P41279 467 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 CYB561P49447 251 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 TNFSF10P50591 281 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 NRG3P56975 720 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 OR1C1Q15619 314 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 OPN5Q6U736 354 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 IL20RBQ6UXL0 311 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 C6orf120Q7Z4R8 191 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 ZNF227Q86WZ6 799 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 HPS6Q86YV9 775 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 CYP4Z2PQ8N1L4 340 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC15A4Q8N697 577 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 OR4N2Q8NGD1 307 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC9A6Q92581 669 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 JADE3Q92613 823 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 HSPBAP1Q96EW2 488 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 PAIP1Q9H074 479 aaKnown RBP17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 HPF1Q9NWY4 346 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 LRFN1Q9P244 771 aa17.51■□□□□ 0.39
CLPTM1-209ENST00000588855 TO15178 435 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 ACOX3O15254 700 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 NEURL1O76050 574 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 ANP32DO95626 131 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 ABCD3P28288 659 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 ADSLP30566 484 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 CHI3L1P36222 383 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 PRIM2P49643 509 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 RPS26P62854 115 aaKnown RBP17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 ZNHIT3Q15649 155 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 EXOSC6Q5RKV6 272 aaKnown RBP17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 SAXO2Q658L1 398 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 BHLHB9Q6PI77 547 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 TRIML2Q8N7C3 387 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC16A11Q8NCK7 471 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 MDS2Q8NDY4 140 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 TSPEARQ8WU66 669 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC35G5Q96KT7 338 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms