RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	TCEANC	Q8N8B7	351 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CREB3L4	Q8TEY5	395 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	OSTF1	Q92882	214 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RAB8B	Q92930	207 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	C12orf66	Q96MD2	445 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	OR5M11	Q96RB7	305 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CNPPD1	Q9BV87	410 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SORBS1	Q9BX66	1292 aa	Known RBP	13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	GLIPR2	Q9H4G4	154 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TBC1D17	Q9HA65	648 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	FBRS	Q9HAH7	460 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLAMF7	Q9NQ25	335 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	WNT16	Q9UBV4	365 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	A4GNT	Q9UNA3	340 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZNF780B	Q9Y6R6	833 aa		13.23	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CHD6	Q8TD26	2715 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516		A0A1W2PPV9	198 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	IGLON5	A6NGN9	336 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RTCA	O00442	366 aa	Known RBP	13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC30A4	O14863	429 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PRODH	O43272	600 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TMPRSS11D	O60235	418 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CS	O75390	466 aa	Known RBP	13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	APOD	P05090	189 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HMGN1	P05114	100 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ALPP	P05187	535 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SERPIND1	P05546	499 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KRT8	P05787	483 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TSPAN19	P0C672	248 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ACP2	P11117	423 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CPE	P16870	476 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PTBP1	P26599	531 aa	Known RBP eCLIP	13.22	□□□□□ -0.29	4e-7	■■■□□ 17.4
NEDD4L-223	ENST00000588516	RPS21	P63220	83 aa	Known RBP	13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CDK5	Q00535	292 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	BNC1	Q01954	994 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SCN1B	Q07699	218 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	WSCD2	Q2TBF2	565 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CYP27C1	Q4G0S4	372 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC27A4	Q6P1M0	643 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	USP30	Q70CQ3	517 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	YAF2	Q8IY57	180 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	OR2L5	Q8NG80	312 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	OR4K5	Q8NGD3	323 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PIGX	Q8TBF5	258 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC7A13	Q8TCU3	470 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ASB16	Q96NS5	453 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MENT	Q9BUN1	341 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HHATL	Q9HCP6	504 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TVP23B	Q9NYZ1	205 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC23A2	Q9UGH3	650 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	ZNF232	Q9UNY5	417 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SIT1	Q9Y3P8	196 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CMAHP	Q9Y471	501 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CCDC88C	Q9P219	2028 aa		13.22	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TLX2	O43763	284 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	GPX5	O75715	221 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SOX30	O94993	753 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TBX6	O95947	436 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TRAPPC2	P0DI81	140 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TRAPPC2B	P0DI82	140 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TNNI3	P19429	210 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	HIST1H1T	P22492	207 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CFL1	P23528	166 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PRKAR1B	P31321	381 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	GRK5	P34947	590 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	CAPZA2	P47755	286 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	WNT4	P56705	351 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TAS2R41	P59536	307 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RPS26	P62854	115 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TSPAN31	Q12999	210 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLAMF1	Q13291	335 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SSX1	Q16384	188 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SNAPC1	Q16533	368 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SYPL1	Q16563	259 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	GPAT3	Q53EU6	434 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	FAM78A	Q5JUQ0	283 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MRM1	Q6IN84	353 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	XKRX	Q6PP77	449 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RASSF6	Q6ZTQ3	369 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SZRD1	Q7Z422	152 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	UBE3D	Q7Z6J8	389 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MRGPRE	Q86SM8	312 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	GDPD1	Q8N9F7	314 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	MFSD9	Q8NBP5	474 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PLA2G15	Q8NCC3	412 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	TMEM163	Q8TC26	289 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	PMM1	Q92871	262 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	UFD1	Q92890	307 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SLC22A18	Q96BI1	424 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	KCTD7	Q96MP8	289 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	LRRC3B	Q96PB8	259 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	SFXN1	Q9H9B4	322 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	LHX9	Q9NQ69	397 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	DNAJC27	Q9NZQ0	273 aa		13.21	□□□□□ -0.29
NEDD4L-223	ENST00000588516	FEZF1	A0PJY2	475 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms