RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ABOP16442 354 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 HPCAL1P37235 193 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 HSF1Q00613 529 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 PLCXD2Q0VAA5 305 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 CMPK2Q5EBM0 449 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 IL23RQ5VWK5 629 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 TMEM107Q6UX40 140 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 MAMDC2Q7Z304 686 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-217ENST00000588230 FJX1Q86VR8 437 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 SPPL2CQ8IUH8 684 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 OR52N2Q8NGI0 321 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 ZFP28Q8NHY6 868 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 CIDECQ96AQ7 238 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-217ENST00000588230 MTERF3Q96E29 417 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 PPP1R36Q96LQ0 422 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 DEFB127Q9H1M4 99 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 SH3BGRL2Q9UJC5 107 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 CNOT11Q9UKZ1 510 aaKnown RBP17.65■□□□□ 0.42
CIRBP-217ENST00000588230 BOKQ9UMX3 212 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-217ENST00000588230 EIF3LQ9Y262 564 aaKnown RBP17.65■□□□□ 0.42
CIRBP-217ENST00000588230 ZNF407Q9C0G0 2248 aa17.65■□□□□ 0.42
CIRBP-217ENST00000588230 DNAJC13O75165 2243 aa17.64■□□□□ 0.42
CIRBP-217ENST00000588230 FRG2CA6NGY1 282 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 PLOD2O00469 737 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 NME6O75414 186 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ERN1O75460 977 aaKnown RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 PDE9AO76083 593 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 GLSO94925 669 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ABCB1P08183 1280 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 GPC1P35052 558 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 RPL3P39023 403 aaKnown RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 FOXO1Q12778 655 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 HSPB3Q12988 150 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 MAD2L1Q13257 205 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 PDE7AQ13946 482 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ZNF385BQ569K4 471 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 TBCELQ5QJ74 424 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 PAOXQ6QHF9 649 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ZNF551Q7Z340 670 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 CHERPQ8IWX8 916 aaKnown RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 TRIM42Q8IWZ5 723 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 TMEM251Q8N6I4 163 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 SPPL2AQ8TCT8 520 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ARL8AQ96BM9 186 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 OMA1Q96E52 524 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ELP4Q96EB1 424 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ZBED6CLQ96FA7 236 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 JSRP1Q96MG2 331 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 VSTM2LQ96N03 204 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 BTBD9Q96Q07 612 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 SECISBP2Q96T21 854 aaKnown RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 DOHHQ9BU89 302 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 FOLH1BQ9HBA9 442 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 DDX18Q9NVP1 670 aaKnown RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 HAO1Q9UJM8 370 aa17.64■□□□□ 0.41
CIRBP-217ENST00000588230 C19orf53Q9UNZ5 99 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-217ENST00000588230 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 TO15178 435 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 ZG16O60844 167 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 COL8A1P27658 744 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 CA7P43166 264 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 MANFP55145 182 aaKnown RBP17.63■□□□□ 0.41
CIRBP-217ENST00000588230 CORO7P57737 925 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 EMX2Q04743 252 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 ZNF155Q12901 538 aaPredicted RBP17.63■□□□□ 0.41
CIRBP-217ENST00000588230 PTGR1Q14914 329 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 ATG16L1Q676U5 607 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 HDXQ7Z353 690 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 NUP54Q7Z3B4 507 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 SLC34A3Q8N130 599 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 FAM109AQ8N4B1 249 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 PROK2Q9HC23 129 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 ZFP64Q9NPA5 681 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 PNPOQ9NVS9 261 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 THAP1Q9NVV9 213 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 ATP6V1HQ9UI12 483 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 ZNF835Q9Y2P0 537 aa17.63■□□□□ 0.41
CIRBP-217ENST00000588230 A0A1B0GTH9 108 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 UPK1AO00322 258 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 CCL21O00585 134 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 SCAMP2O15127 329 aaKnown RBP17.62■□□□□ 0.41
CIRBP-217ENST00000588230 ZNHIT1O43257 154 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 REM1O75628 298 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 SNX4O95219 450 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 CT45A8P0DMV1 189 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 CT45A9P0DMV2 189 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 PTGS2P35354 604 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 KRT20P35900 424 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 MAGEA5P43359 124 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 PSPHP78330 225 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 C3AR1Q16581 482 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 HYAL4Q2M3T9 481 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 SMU1Q2TAY7 513 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 CT45A2Q5DJT8 189 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 TMEM198Q66K66 360 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 ARHGAP11AQ6P4F7 1023 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 SLC44A2Q8IWA5 706 aaPredicted RBP17.62■□□□□ 0.41
CIRBP-217ENST00000588230 OR2L13Q8N349 312 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 GOLGA6L1Q8N7Z2 621 aa17.62■□□□□ 0.41
CIRBP-217ENST00000588230 RAB3IL1Q8TBN0 382 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms