RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 LINC01555Q8NAE3 123 aa2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 NFAM1Q8NET5 270 aaPredicted RBP2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 OR52J3Q8NH60 311 aa2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 FAM46BQ96A09 425 aa2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 TSPYL1Q9H0U9 437 aa2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 ZWILCHQ9H900 591 aa2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 EXOSC3Q9NQT5 275 aaKnown RBP2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 FOXA2Q9Y261 457 aaPredicted RBP2.83□□□□□ -1.96
CACNA1A-208ENST00000587451 IGKV6-21A0A0C4DH24 114 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 A0A0U1RQK1 487 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 EEF2KO00418 725 aaKnown RBP2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 REC8O95072 547 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 PGK1P00558 417 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 IGHV3-23P01764 117 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 FCARP24071 287 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 SERPINH1P50454 418 aaKnown RBP2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 HAND2P61296 217 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 HERV-K104P63124 156 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 YWHAHQ04917 246 aaPredicted RBP2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 DCAF4L1Q3SXM0 396 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 IFI44LQ53G44 452 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 METTL11BQ5VVY1 283 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 HIST2H2AA3Q6FI13 130 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 SYCP3Q8IZU3 236 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 LHX4Q969G2 390 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 MRPL53Q96EL3 112 aaKnown RBP2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 EPSTI1Q96J88 318 aa2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 COPS7BQ9H9Q2 264 aaPredicted RBP2.82□□□□□ -1.96
CACNA1A-208ENST00000587451 A0A0J9YVX5 310 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 TRBV7-9A0A0J9YWB2 115 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 PANO1I0J062 215 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 ARPC1BO15143 372 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 HTATSF1O43719 755 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 RANBP6O60518 1105 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 CA11O75493 328 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 APRTP07741 180 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 HOXB7P09629 217 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 ALOX5P09917 674 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 HIST1H2AGP0C0S8 130 aaPredicted RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 VCLP18206 1134 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 UGT1A6P19224 532 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 COPB2P35606 906 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 ACVR1BP36896 505 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 PUDPQ08623 228 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 EIF2B1Q14232 305 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 PRR4Q16378 134 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 GPAT3Q53EU6 434 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 Q6P435 159 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 RANBP3LQ86VV4 465 aaPredicted RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 HIST1H2ACQ93077 130 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 RAB39BQ96DA2 213 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 SLC25A38Q96DW6 304 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 NANOGQ9H9S0 305 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 ZCCHC17Q9NP64 241 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 NARFQ9UHQ1 456 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 TRMT6Q9UJA5 497 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 KLK12Q9UKR0 248 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 LIPT1Q9Y234 373 aa2.81□□□□□ -1.96
CACNA1A-208ENST00000587451 B4DXG7 233 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 OR7A17O14581 309 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 RTN2O75298 545 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 ECDO95905 644 aaPredicted RBP2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 EFNA3P52797 238 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 ZNF45Q02386 682 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 NPRL3Q12980 569 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 IL17AQ16552 155 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 FAM133BQ5BKY9 247 aaKnown RBP2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 SPATA46Q5T0L3 261 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 PRAMEF8Q5VWM4 474 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 PRR5LQ6MZQ0 368 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 ANKRD49Q8WVL7 239 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 TSSK1BQ9BXA7 367 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 GLT8D2Q9H1C3 349 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 Q9H3A6 140 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 GRPEL1Q9HAV7 217 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 ZCCHC3Q9NUD5 404 aaKnown RBP2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 TRPC4Q9UBN4 977 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 MAD2L2Q9UI95 211 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 RAB26Q9ULW5 256 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 ENTPD4Q9Y227 616 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 DHRS7Q9Y394 339 aa2.8□□□□□ -1.96
CACNA1A-208ENST00000587451 A4D1N5 150 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 NOL4O94818 638 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 RPS2P15880 293 aaKnown RBP2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 FUT3P21217 361 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 GABRR1P24046 479 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 CTNNB1P35222 781 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 NF2P35240 595 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 TCF7P36402 384 aaPredicted RBP2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 SCARB2Q14108 478 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 GK2Q14410 553 aaPredicted RBP2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 CAMK4Q16566 473 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 ZNF528Q3MIS6 628 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 CCDC14Q49A88 953 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 NKAIN2Q5VXU1 208 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 IRGCQ6NXR0 463 aa2.79□□□□□ -1.96
CACNA1A-208ENST00000587451 B3GLCTQ6Y288 498 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms