RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SOX3P41225 446 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 PRIM2P49643 509 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 PRKAG1P54619 331 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 SF3A3Q12874 501 aaKnown RBP eCLIP17.7■□□□□ 0.427e-6■■■■□ 25.9
DDX39A-204ENST00000586558 OR1C1Q15619 314 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 MAPKAPK3Q16644 382 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 CT45A2Q5DJT8 189 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 MFSD12Q6NUT3 480 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 CYP4Z2PQ8N1L4 340 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 MDS2Q8NDY4 140 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 TSPEARQ8WU66 669 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 HOXB13Q92826 284 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-204ENST00000586558 PNPLA2Q96AD5 504 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 SPDL1Q96EA4 605 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 SGCZQ96LD1 299 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 PANX1Q96RD7 426 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 LMF2Q9BU23 707 aaKnown RBP17.7■□□□□ 0.42
DDX39A-204ENST00000586558 TRIM4Q9C037 500 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 EPN3Q9H201 632 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 EQTNQ9NQ60 294 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 HPF1Q9NWY4 346 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 LRFN1Q9P244 771 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 ERVK-11Q9UQG0 969 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 PCDHGB6Q9Y5F9 930 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 RNF103-CHMP3A0A140T963 221 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 NR5A2O00482 541 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 RFXANKO14593 260 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 SLC22A2O15244 555 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 SHOX2O60902 331 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 NEURL1O76050 574 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 OR6B1O95007 311 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 CPSF4O95639 269 aaKnown RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 F10P00742 488 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 FBXO45P0C2W1 286 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 TRPC1P48995 793 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 TP53BP2Q13625 1128 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF169Q14929 603 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF791Q3KP31 576 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF468Q5VIY5 522 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 SLC6A19Q695T7 634 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 TMEM125Q96AQ2 219 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 VPS33AQ96AX1 596 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 SPACA9Q96E40 222 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 GIMAP5Q96F15 307 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 BBC3Q96PG8 261 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-204ENST00000586558 Q9N2J8 555 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 SERHLQ9NQF3 203 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 SAR1AQ9NR31 198 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ANKRD10Q9NXR5 420 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ANAPC2Q9UJX6 822 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ADAM21Q9UKJ8 722 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 VPS4AQ9UN37 437 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 CSAG2Q9Y5P2 127 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 NPFFR2Q9Y5X5 522 aa17.69■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF354AO60765 605 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-204ENST00000586558 CCDC22O60826 627 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 HMGN2P05204 90 aaKnown RBP17.68■□□□□ 0.42
DDX39A-204ENST00000586558 CD46P15529 392 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 ABCD3P28288 659 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 MAP3K8P41279 467 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 CORO7P57737 925 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 PSG6Q00889 435 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 NNATQ16517 81 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 CYP27C1Q4G0S4 372 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 LYPD8Q6UX82 237 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 NPSR1Q6W5P4 371 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 RTL4Q6ZR62 310 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 SLC44A2Q8IWA5 706 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-204ENST00000586558 SLC34A3Q8N130 599 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 GOLM1Q8NBJ4 401 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 C5orf34Q96MH7 638 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 ACTRT3Q9BYD9 372 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 TIMMDC1Q9NPL8 285 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 SLC52A3Q9NQ40 469 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 GPATCH2Q9NW75 528 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 GIN1Q9NXP7 522 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 FAF1Q9UNN5 650 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-204ENST00000586558 OR10H1Q9Y4A9 318 aa17.68■□□□□ 0.42
DDX39A-204ENST00000586558 A0A1W2PP18 115 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 ABCB7O75027 752 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 NME6O75414 186 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-204ENST00000586558 SLC25A12O75746 678 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 NKX2-2O95096 273 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 ZCCHC18P0CG32 403 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 CAPN3P20807 821 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 PLCXD2Q0VAA5 305 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 NFATC3Q12968 1075 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 LASP1Q14847 261 aaKnown RBP17.67■□□□□ 0.42
DDX39A-204ENST00000586558 NTRK2Q16620 822 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 NADK2Q4G0N4 442 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 EXOSC6Q5RKV6 272 aaKnown RBP17.67■□□□□ 0.42
DDX39A-204ENST00000586558 C6orf10Q5SRN2 563 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 IL20RBQ6UXL0 311 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF227Q86WZ6 799 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 TMEM178AQ8NBL3 297 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 CATSPER1Q8NEC5 780 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 OR5AK3PQ8NH89 298 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 GTF2H4Q92759 462 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 NEURL3Q96EH8 262 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms