RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ART5Q96L15 291 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 DPH1Q9BZG8 443 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 CXorf36Q9H7Y0 433 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 EVA1AQ9H8M9 152 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 WDR54Q9H977 334 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 SLAMF7Q9NQ25 335 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 SIRT3Q9NTG7 399 aaPredicted RBP11.8□□□□□ -0.52
VMP1-202ENST00000585847 CCM2LQ9NUG4 571 aaPredicted RBP11.8□□□□□ -0.52
VMP1-202ENST00000585847 P2RX2Q9UBL9 471 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 ANAPC2Q9UJX6 822 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 CFAP46Q8IYW2 2715 aa11.8□□□□□ -0.52
VMP1-202ENST00000585847 TENM4Q6N022 2769 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 C9J4A7 227 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 PGRMC2O15173 223 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 CRATP43155 626 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 STT3AP46977 705 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 MVDP53602 400 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 DSTNP60981 165 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 BTG2P78543 158 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 MS4A2Q01362 244 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 FOLH1Q04609 750 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 STX4Q12846 297 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 GTDC1Q4AE62 458 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 ANGPTL8Q6UXH0 198 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 IFNEQ86WN2 208 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 ZZZ3Q8IYH5 903 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 RNF148Q8N7C7 305 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 PLPP5Q8NEB5 264 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 FAM162AQ96A26 154 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 ANKRD9Q96BM1 317 aaPredicted RBP11.79□□□□□ -0.52
VMP1-202ENST00000585847 ELP4Q96EB1 424 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 SLC35G5Q96KT7 338 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 YIPF2Q9BWQ6 316 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 BTBD2Q9BX70 525 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 GPR87Q9BY21 358 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 VCXQ9H320 206 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 GPN2Q9H9Y4 310 aaPredicted RBP11.79□□□□□ -0.52
VMP1-202ENST00000585847 NECTIN3Q9NQS3 549 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 PRTFDC1Q9NRG1 225 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 EXD2Q9NVH0 621 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 ADPRHL2Q9NX46 363 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 C19orf53Q9UNZ5 99 aaPredicted RBP11.79□□□□□ -0.52
VMP1-202ENST00000585847 CFL2Q9Y281 166 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 PTRH2Q9Y3E5 179 aaKnown RBP11.79□□□□□ -0.52
VMP1-202ENST00000585847 AP4S1Q9Y587 144 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
VMP1-202ENST00000585847 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ZNF462Q96JM2 2506 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 IGKV3D-11A0A0A0MRZ8 115 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 A0A1W2PS29 197 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 A8MUI8 341 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 IDSB3KWA1 339 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 C5orf58C9J3I9 102 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 J3QKU1 62 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ERVH48-1M5A8F1 160 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 OR10H2O60403 315 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 B4GALT2O60909 372 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 CDC123O75794 336 aaPredicted RBP11.78□□□□□ -0.52
VMP1-202ENST00000585847 RAP2AP10114 183 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ARAFP10398 606 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 CRISP3P54108 245 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 UCNP55089 124 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 TMPRSS3P57727 454 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 OCA2Q04671 838 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 MAP4K2Q12851 820 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 SELPLGQ14242 412 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ZNF628Q5EBL2 1059 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ATAD3BQ5T9A4 648 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ATP1A1-AS1Q5TC04 95 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 REEP3Q6NUK4 255 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 TMEM205Q6UW68 189 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ZNF551Q7Z340 670 aaPredicted RBP11.78□□□□□ -0.52
VMP1-202ENST00000585847 C6orf120Q7Z4R8 191 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 PPP1R32Q7Z5V6 425 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 RNF130Q86XS8 419 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 KRT73Q86Y46 540 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 GALNT12Q8IXK2 581 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 PQLC1Q8N2U9 271 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 CDRT4Q8N9R6 151 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 OR7G1Q8NGA0 311 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 NUDT8Q8WV74 236 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 TSLPQ969D9 159 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 AURKBQ96GD4 344 aaPredicted RBP11.78□□□□□ -0.52
VMP1-202ENST00000585847 RBM18Q96H35 190 aaKnown RBP11.78□□□□□ -0.52
VMP1-202ENST00000585847 STACQ99469 402 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 ACTRT3Q9BYD9 372 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 TRIM4Q9C037 500 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 PCDHAC1Q9H158 963 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 IKZF5Q9H5V7 419 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 CACYBPQ9HB71 228 aaKnown RBP11.78□□□□□ -0.52
VMP1-202ENST00000585847 BCL2L10Q9HD36 194 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 POLE3Q9NRF9 147 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 DUSP22Q9NRW4 184 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 SLC6A13Q9NSD5 602 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 DCAF13Q9NV06 445 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms