RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PIGUQ9H490 435 aa15□□□□□ -0.01
SS18-226ENST00000585241 EQTNQ9NQ60 294 aa15□□□□□ -0.01
SS18-226ENST00000585241 BCAP29Q9UHQ4 241 aa15□□□□□ -0.01
SS18-226ENST00000585241 MSRB2Q9Y3D2 182 aa15□□□□□ -0.01
SS18-226ENST00000585241 TFPTP0C1Z6 253 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 OR12D1P0DN82 309 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 GGT1P19440 569 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 CASP9P55211 416 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 SLC26A5P58743 744 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 PSG6Q00889 435 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 MS4A2Q01362 244 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 ZNF155Q12901 538 aaPredicted RBP14.99□□□□□ -0.01
SS18-226ENST00000585241 MYBPC3Q14896 1274 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 MAPK11Q15759 364 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 DUSP5Q16690 384 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 HEPHL1Q6MZM0 1159 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 IFNEQ86WN2 208 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 SLC30A8Q8IWU4 369 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 IL22RA1Q8N6P7 574 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 ZSCAN1Q8NBB4 408 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 SLC16A11Q8NCK7 471 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 C11orf65Q8NCR3 313 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 FAM13CQ8NE31 585 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 OR11G2Q8NGC1 345 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 OR5D16Q8NGK9 328 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 OR8K3Q8NH51 312 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 ADAMTS15Q8TE58 950 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 NCLNQ969V3 563 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 CCDC124Q96CT7 223 aaKnown RBP14.99□□□□□ -0.01
SS18-226ENST00000585241 SLC35A4Q96G79 324 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 VMP1Q96GC9 406 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 BTBD9Q96Q07 612 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 EFHD1Q9BUP0 239 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 ACTR3BQ9P1U1 418 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 COPS7AQ9UBW8 275 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 IL17BQ9UHF5 180 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 MAGEL2Q9UJ55 1249 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 ZNF223Q9UK11 482 aaPredicted RBP14.99□□□□□ -0.01
SS18-226ENST00000585241 DTX4Q9Y2E6 619 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 ZNF451Q9Y4E5 1061 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 SNX13Q9Y5W8 968 aa14.99□□□□□ -0.01
SS18-226ENST00000585241 PRAMEF27A3QJZ7 478 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 NME6O75414 186 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 SEC24DO94855 1032 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 ALOX5P09917 674 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 TCN1P20061 433 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 FUT5Q11128 374 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 IL10RAQ13651 578 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 EBPQ15125 230 aaKnown RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 EXT1Q16394 746 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 PRAMEF8Q5VWM4 474 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 PRAMEF7Q5VXH5 474 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 AP1ARQ63HQ0 302 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 PLAG1Q6DJT9 500 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 LCN8Q6JVE9 175 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 NDUFAF7Q7L592 441 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 RAB43Q86YS6 212 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 C9orf40Q8IXQ3 194 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 ZNF441Q8N8Z8 693 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 CHDHQ8NE62 594 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 C17orf47Q8NEP4 570 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 OR52E4Q8NGH9 312 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 RAB8BQ92930 207 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 ADIPOR1Q96A54 375 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 KIAA1143Q96AT1 154 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 VPS50Q96JG6 964 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 YIPF4Q9BSR8 244 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 ITPAQ9BY32 194 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 PCDHAC1Q9H158 963 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 PIF1Q9H611 641 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 GPN2Q9H9Y4 310 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 P2RX2Q9UBL9 471 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 LIPT1Q9Y234 373 aa14.98□□□□□ -0.01
SS18-226ENST00000585241 GPR55Q9Y2T6 319 aaPredicted RBP14.98□□□□□ -0.01
SS18-226ENST00000585241 WDFY3Q8IZQ1 3526 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 ARPC2O15144 300 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 CREG1O75629 220 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 CIB2O75838 187 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 AK1P00568 194 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 HPP00738 406 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 GUSBP08236 651 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 CT45A8P0DMV1 189 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 CT45A9P0DMV2 189 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 TRHRP34981 398 aaPredicted RBP14.97□□□□□ -0.01
SS18-226ENST00000585241 MSX2P35548 267 aaPredicted RBP14.97□□□□□ -0.01
SS18-226ENST00000585241 PPICP45877 212 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 ID4P47928 161 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 PCBP3P57721 371 aaKnown RBP14.97□□□□□ -0.01
SS18-226ENST00000585241 CORO7P57737 925 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 DCAF7P61962 342 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 CDK6Q00534 326 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 SCARB2Q14108 478 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 TGIF1Q15583 401 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 ZNHIT3Q15649 155 aaPredicted RBP14.97□□□□□ -0.01
SS18-226ENST00000585241 CT45A2Q5DJT8 189 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 NPSR1Q6W5P4 371 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 CCDC80Q76M96 950 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 MRGPREQ86SM8 312 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 PROSER1Q86XN7 944 aa14.97□□□□□ -0.01
SS18-226ENST00000585241 HIPK4Q8NE63 616 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms