RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 PTGER4P35408 488 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 RPL3P39023 403 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 DCTP40126 519 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 CASP3P42574 277 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 ASMTP46597 345 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 MRPS22P82650 360 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 BTKQ06187 659 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 GABPB1Q06547 395 aaPredicted RBP15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 C2orf80Q0P641 193 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 PLCXD2Q0VAA5 305 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 PDE7AQ13946 482 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 LTB4RQ15722 352 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 UGT3A2Q3SY77 523 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 XKR7Q5GH72 579 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 ARL13AQ5H913 290 aaPredicted RBP15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 SLC30A6Q6NXT4 461 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 SCIMPQ6UWF3 145 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 PACS2Q86VP3 889 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 TICAM1Q8IUC6 712 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 OR9A2Q8NGT5 310 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 HGDQ93099 445 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 TRAF6Q9Y4K3 522 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 POLR3HQ9Y535 204 aaPredicted RBP15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 UNC79Q9P2D8 2635 aa15.38■□□□□ 0.05
CSNK1D-225ENST00000584913 TRGV5A0A0B4J1U4 118 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 FAM47E-STBD1D6RA91 191 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 SHOX2O60902 331 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 ZWINTO95229 277 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 CLDN14O95500 239 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 GABRA1P14867 456 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 MAPK1P28482 360 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 MDH1P40925 334 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 FRKP42685 505 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 MAN2A2P49641 1150 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 GYS2P54840 703 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 FBXW4P57775 412 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 MRPS35P82673 323 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 EFR3AQ14156 821 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 EXOSC7Q15024 291 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 ZNF630Q2M218 657 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 PRAMEF20Q5VT98 475 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 FAM219BQ5XKK7 198 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 ACAD11Q709F0 780 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 OR2L13Q8N349 312 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 NATD1Q8N6N6 113 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 ADCY4Q8NFM4 1077 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 DOK4Q8TEW6 326 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 RNF138Q8WVD3 245 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 TWIST2Q8WVJ9 160 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 ASB5Q8WWX0 329 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 OMA1Q96E52 524 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 PPP3R2Q96LZ3 170 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 RILPQ96NA2 401 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 DEFB127Q9H1M4 99 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 UBQLN3Q9H347 655 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 TUBB1Q9H4B7 451 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 RUBCNLQ9H714 662 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 NKIRAS1Q9NYS0 192 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 COQ3Q9NZJ6 369 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 SH3BGRL2Q9UJC5 107 aa15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 C19orf53Q9UNZ5 99 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 EXO1Q9UQ84 846 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-225ENST00000584913 DIDO1Q9BTC0 2240 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 TMEM114B3SHH9 223 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 G3V3Y1 287 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 HNRNPRO43390 633 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 SPAG7O75391 227 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 ERN1O75460 977 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 HPNP05981 417 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 CHRNGP07510 517 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 CT45A8P0DMV1 189 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 CT45A9P0DMV2 189 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 PNLIPRP2P54317 469 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 SMU1Q2TAY7 513 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 CT45A2Q5DJT8 189 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 NHSL2Q5HYW2 709 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 EMC4Q5J8M3 183 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 R3HCC1LQ7Z5L2 792 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 OR2T11Q8NH01 316 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 ZFP28Q8NHY6 868 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 NEIL3Q8TAT5 605 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 TMCO6Q96DC7 493 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 AMDHD1Q96NU7 426 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 MECRQ9BV79 373 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 REEP4Q9H6H4 257 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 ACSS1Q9NUB1 689 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 INTS9Q9NV88 658 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 C15orf41Q9Y2V0 281 aa15.36■□□□□ 0.05
CSNK1D-225ENST00000584913 UTP20O75691 2785 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 PRSS44E7EML9 344 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 DHRS4L1P0CG22 281 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 CREB1P16220 341 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 SDC1P18827 310 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 KRT20P35900 424 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 NCBP2P52298 156 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 RPL38P63173 70 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 MLC1Q15049 377 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 SH2D4BQ5SQS7 431 aa15.35■□□□□ 0.05
CSNK1D-225ENST00000584913 WLSQ5T9L3 541 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms