RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	NAV2	Q8IVL1	2488 aa		3.11	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GREB1L	Q9C091	1923 aa	Predicted RBP	3.11	□□□□□ -1.91
PPP4R1-229	ENST00000584754	LAMA1	P25391	3075 aa		3.11	□□□□□ -1.91
PPP4R1-229	ENST00000584754	UNC79	Q9P2D8	2635 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FOCAD	Q5VW36	1801 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF236	Q9UL36	1845 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MYO5A	Q9Y4I1	1855 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C5orf51	A6NDU8	294 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TMCO5B	A8MYB1	307 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	P2RX6	O15547	441 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TNFSF12	O43508	249 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	VEGFD	O43915	354 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CSDE1	O75534	798 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CNMD	O75829	334 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CPNE6	O95741	557 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TBX6	O95947	436 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	RPLP0	P05388	317 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PGK2	P07205	417 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PC	P11498	1178 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ODC1	P11926	461 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CYBA	P13498	195 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	UGT1A6	P19224	532 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PRKACG	P22612	351 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MMP12	P39900	470 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZFP36L2	P47974	494 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SMS	P52788	366 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	BACE1	P56817	501 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	KRTAP10-12	P60413	245 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	IRX3	P78415	501 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C17orf67	Q0P5P2	114 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NME3	Q13232	169 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FASTKD3	Q14CZ7	662 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HEPACAM	Q14CZ8	416 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FCN2	Q15485	313 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	OR1C1	Q15619	314 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	TRADD	Q15628	312 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	INA	Q16352	499 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C3AR1	Q16581	482 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CAVIN4	Q5BKX8	364 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NKAIN2	Q5VXU1	208 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MFSD14C	Q5VZR4	134 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PTAR1	Q7Z6K3	402 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ERC1	Q8IUD2	1116 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	STH	Q8IWL8	128 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	METTL4	Q8N3J2	472 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DCLK2	Q8N568	766 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ICA1L	Q8NDH6	482 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	OR9Q2	Q8NGE9	314 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	RPLP0P6	Q8NHW5	317 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	UBTD2	Q8WUN7	234 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	C2orf48	Q96LS8	159 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NEDD4L	Q96PU5	975 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PSMB7	Q99436	277 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	OPRPN	Q99935	248 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	OVOL2	Q9BRP0	275 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MCRIP2	Q9BUT9	160 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ACPT	Q9BZG2	426 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ABCG4	Q9H172	646 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF665	Q9H7R5	613 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	KCNK13	Q9HB14	408 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SYTL2	Q9HCH5	934 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PLCXD1	Q9NUJ7	323 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	EXOG	Q9Y2C4	368 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	RPH3A	Q9Y2J0	694 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	RNF215	Q9Y6U7	377 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HELZ2	Q9BYK8	2649 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	OTOGL	Q3ZCN5	2332 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	LOC400499	M0QZD8	3231 aa		3.1	□□□□□ -1.91
PPP4R1-229	ENST00000584754	COL11A1	P12107	1806 aa	Predicted RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PARP14	Q460N5	1801 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	DMXL2	Q8TDJ6	3036 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MYH1	P12882	1939 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ITPR1	Q14643	2758 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754		A0A1W2PR80	420 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	KRT87P	A6NCN2	255 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CFAP73	A6NFT4	308 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754		K7EQD1	137 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NR5A2	O00482	541 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF195	O14628	629 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	PRPSAP2	O60256	369 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	KIAA0513	O60268	411 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	NME6	O75414	186 aa	Predicted RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	GMNN	O75496	209 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	LYN	P07948	512 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF883	P0CG24	379 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	MBL2	P11226	248 aa	Predicted RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	EDNRA	P25101	427 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CCND2	P30279	289 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	BTD	P43251	543 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC6A12	P48065	614 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FHIT	P49789	147 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CNN1	P51911	297 aa	Known RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	HNRNPF	P52597	415 aa	Known RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	ZNF177	Q13360	481 aa	Predicted RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	FASTK	Q14296	549 aa	Known RBP	3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	SLC1A5	Q15758	541 aa		3.09	□□□□□ -1.91
PPP4R1-229	ENST00000584754	CARTPT	Q16568	116 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms